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3. Enriched editing regions and immune related genes for RAB11FIP1


all structure

check button Enriched editing regions and immune related genes.
* First, the associations between enriched editing regions and genes were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the gene relationships with immune were tested by three analyses: whether the gene is an immune gene (InnateDB、Immport、Immunome、Immunogenetic Related Information Source (IRIS)), whether the gene is associated with immune infiltration and whether the gene is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of genes with the fraction of different immune cells and the scores of 50 hallmark gene sets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeGenebetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark
chr8:37892502-37893787:-LAMLEERENSG00000148300,REXO40.43073.7481e-032.3152e-110.5219imageNDHX9;ELAVL1;HNRNPA1;HNRNPC;IGF2BP2;NOP56;NOP58;U2AF2NAMonocytesGSVA_HALLMARK_MYC_TARGETS_V2
chr8:37892502-37893787:-LAMLEERENSG00000197283,SYNGAP10.37861.7239e-022.2209e-070.4169imageNELAVL1;HNRNPA1;HNRNPC;IGF2BP2;NOP56;NOP58;U2AF2NAMonocytesGSVA_HALLMARK_PANCREAS_BETA_CELLS
chr8:37892502-37893787:-LAMLEERENSG00000235781,XXbac-BPG249D20.90.33943.5770e-024.1178e-100.4926imageNHNRNPCNAB_cells_memoryGSVA_HALLMARK_PANCREAS_BETA_CELLS
chr8:37892502-37893787:-LAMLEERENSG00000275529,SNORD116-40.32453.4857e-021.6656e-100.5021imageNNNAB_cells_naiveGSVA_HALLMARK_ADIPOGENESIS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000067445,TRO0.35721.4370e-023.5337e-080.4382imageNAIFM1;AUH;BUD13;CELF2;CNBP;CSTF2T;DGCR8;DHX9;DICER1;DKC1;ELAVL1;FAM120A;FBL;FMR1;FUS;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;LARP7;LIN28;LIN28A;MBNL2;MOV10;NOP56;NOP58;NUMA1;PCBP2;PRPF8;RANGAP1;RBFOX2;RBM10;RNF219;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF7;SRSF9;TAF15;TARDBP;TRA2A;U2AF1;U2AF2;UPF1;ZNF184TROPlasma_cellsGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATION
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000100139,MICALL10.35741.5857e-021.2499e-080.4510imageNADAR;AIFM1;AUH;BUD13;CBX7;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LIN28;LIN28A;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NUMA1;PCBP2;PRPF8;PTBP1;QKI;RANGAP1;RBFOX2;RBM10;RBM27;RNF219;SAFB2;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1;YTHDF1;YWHAG;ZNF184NAB_cells_naiveGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALING
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000100403,ZC3H7B0.45487.4293e-045.8974e-080.4317imageNACIN1;ADAR;AIFM1;AUH;BUD13;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;EIF4G1;EIF4G2;ELAVL1;EWSR1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPD;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LARP7;LIN28;LIN28A;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NPM1;NUMA1;PCBP2;PRPF8;PTBP1;PUM2;QKI;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RBM47;RC3H1;RNF219;SAFB2;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF3;SRSF7;SRSF9;TAF15;TARBP2;TARDBP;TIA1;TIAL1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1;YTHDF1;YWHAG;ZFP36;ZNF184NAB_cells_naiveGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000103932,RPAP10.44059.5733e-044.3751e-070.4049imageNACIN1;ADAR;AIFM1;AUH;BUD13;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHSRP;LARP4B;LARP7;LIN28;LIN28A;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NPM1;NUMA1;PCBP2;PRPF8;PTBP1;QKI;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RC3H1;SAFB2;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF3;SRSF7;SRSF9;TAF15;TARBP2;TARDBP;TIA1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1;YTHDF1;YWHAG;ZC3H7B;ZNF184NAMonocytesGSVA_HALLMARK_MYC_TARGETS_V2
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000119673,ACOT20.34222.4651e-022.0307e-070.4155imageNAUH;BUD13;CNBP;CSTF2T;DDX54;DGCR8;DKC1;EIF4A3;ELAVL1;FAM120A;FBL;FMR1;FUS;GTF2F1;HNRNPA1;HNRNPC;HNRNPK;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;KHDRBS2;LARP4B;LIN28B;MBNL2;MOV10;NOP56;NOP58;PCBP2;PRPF8;RANGAP1;RBFOX2;RBM10;SND1;SRSF1;SRSF3;SRSF9;TAF15;TIA1;TIAL1;U2AF1;U2AF2;UPF1;YTHDC1;YTHDF1;ZNF184NAB_cells_naiveGSVA_HALLMARK_PROTEIN_SECRETION
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000142207,URB10.46363.0433e-045.8431e-070.4009imageNACIN1;ADAR;AIFM1;AUH;BUD13;CBX7;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;EIF4G2;ELAVL1;EWSR1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPD;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP7;LIN28;LIN28A;LIN28B;LSM11;MBNL2;MOV10;MSI2;NONO;NOP56;NOP58;NPM1;NUMA1;PCBP2;PRPF8;PTBP1;QKI;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RBM47;RNF219;SAFB2;SBDS;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF3;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TIAL1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1;YTHDF1;YWHAG;ZNF184NAMonocytesGSVA_HALLMARK_MYC_TARGETS_V2
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000148300,REXO40.42542.1134e-037.1922e-120.5299imageNACIN1;AIFM1;AUH;BUD13;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DKC1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LARP7;LIN28;LIN28B;MOV10;MSI2;NONO;NOP56;NOP58;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;SAFB2;SBDS;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF3;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1;YTHDF1;YWHAG;ZC3H7B;ZNF184NAMonocytesGSVA_HALLMARK_MYC_TARGETS_V2
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000160190,SLC37A10.43811.4636e-032.4059e-070.4132imageNACIN1;ADAR;CELF2;CNBP;CSTF2T;DDX42;DDX54;DGCR8;DHX9;DKC1;EIF4A3;ELAVL1;EWSR1;FBL;FMR1;FUS;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;IGF2BP1;IGF2BP2;KHSRP;LIN28;MOV10;NOP56;NOP58;PRPF8;PTBP1;RBFOX2;RBM10;RBM22;RBM27;SF3B4;SMNDC1;SRSF1;SRSF3;TAF15;TARDBP;U2AF2;UPF1;YTHDC1;YTHDF1NAT_cells_CD4_memory_restingGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000163704,PRRT30.42392.4586e-031.1436e-070.4231imageNADAR;AIFM1;CNBP;CSTF2T;DDX3X;DDX54;DGCR8;DKC1;EIF4A3;ELAVL1;FBL;FMR1;FUS;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPU;IGF2BP1;IGF2BP2;IGF2BP3;LARP4B;LIN28;MBNL2;NONO;NOP56;NOP58;NUMA1;RANGAP1;RBFOX2;RBM10;RNF219;SAFB2;SLTM;SRSF1;SRSF9;TAF15;TARDBP;U2AF2;UPF1;XRN2;YTHDF1;YWHAG;ZNF184NAB_cells_naiveGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000167701,GPT0.33982.8047e-024.3667e-070.4049imageNAUH;BUD13;CSTF2T;DDX54;DGCR8;DKC1;EIF4A3;EWSR1;FAM120A;FBL;FUS;GTF2F1;HNRNPK;HNRNPM;HNRNPUL1;IGF2BP1;IGF2BP3;LIN28B;NONO;NOP56;NOP58;PCBP2;PRPF8;RBFOX2;RBM10;RBM27;SF3B4;SLTM;SMNDC1;SRSF1;SRSF7;SRSF9;TAF15;TIA1;U2AF1;U2AF2NAMacrophages_M0GSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000168918,INPP5D0.34972.0082e-026.8868e-080.4297imageNADAR;BUD13;CELF2;CNBP;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DKC1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GTF2F1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP7;LIN28A;LIN28B;MBNL2;MOV10;MSI2;NONO;NOP56;NOP58;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM22;SAFB2;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF3;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1INPP5DB_cells_naiveGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000172889,EGFL70.33982.8438e-023.6196e-070.4076imageNACIN1;AIFM1;AUH;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DGCR8;DICER1;EIF4A3;EIF4G1;EIF4G2;ELAVL1;EWSR1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LARP7;LIN28;LIN28A;LIN28B;LSM11;MBNL2;MOV10;MSI2;NONO;NOP56;NPM1;NUMA1;PRPF8;PTBP1;QKI;RANGAP1;RBFOX2;RBM22;RBM27;SAFB2;SBDS;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF3;TAF15;TARDBP;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1;YWHAG;ZNF184NAMonocytesGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000197283,SYNGAP10.41782.8754e-034.1396e-090.4640imageNACIN1;ADAR;AIFM1;AUH;BUD13;CELF2;CPSF6;CSTF2T;DDX3X;DDX42;DGCR8;DKC1;EIF4A3;EIF4G1;EIF4G2;ELAVL1;EWSR1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LARP7;LIN28;LIN28A;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NPM1;NUMA1;PCBP2;PRPF8;PTBP1;PUM2;RANGAP1;RBFOX2;RBM22;RBM27;RBM47;RC3H1;RNF219;SAFB2;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF3;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TIAL1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1;YTHDF1;YWHAG;ZC3H7B;ZNF184NAMonocytesGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000230772,VN1R108P0.34052.1865e-021.9645e-070.4159imageNNNAMonocytesGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000235781,XXbac-BPG249D20.90.37957.3342e-032.1017e-100.4967imageNEIF4A3;HNRNPC;KHSRP;SRSF1NAB_cells_memoryGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000251322,SHANK30.35112.0507e-022.8143e-090.4685imageNAIFM1;AUH;BUD13;CELF2;CNBP;CSTF2T;DDX54;DGCR8;DHX9;DICER1;DKC1;ELAVL1;FAM120A;FBL;FMR1;FUS;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;KHDRBS1;KHDRBS2;LARP7;LIN28;LIN28B;MBNL2;MOV10;NOP56;NOP58;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RNF219;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF3;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TRA2A;U2AF1;U2AF2;UPF1;YTHDC1;YTHDF1;ZFP36NAB_cells_naiveGSVA_HALLMARK_PANCREAS_BETA_CELLS
ENSG00000156675.14,RAB11FIP1LAMLEAGENSG00000275529,SNORD116-40.29754.5609e-028.3480e-110.5061imageNNNAB_cells_naiveGSVA_HALLMARK_ADIPOGENESIS