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Center for Computational Systems Medicine
Soverview

1. Gene summary of enriched editing regions

Soverview

2. Tumor-specific enriched editing regions

Comparison of enriched editing regions between tumor and normal.

Correlation of enriched editing regions with tumor stages.

Associations of enriched editing regions with cancer survival.

Soverview

3. Enriched editing regions and immune related genes

Soverview

4. Enriched editing regions and immune related splicing

Soverview

5. Enriched editing regions and immune infiltration

Soverview

6. Enriched editing regions and immune gene sets

Correlation of enriched editing regions with epithelial-mesenchymal transition.

Correlations of enriched editing regions with hypoxic.

Associations of enriched editing regions with hallmark gene sets from MSigDB.

Soverview

7. Enriched editing regions and drugs

Correlations between enriched editing regions and drug sensitivity.

Enriched editing regions targeted by drugs from DrugBank database.

Editing gene: MBOAT7 (ImmuneEditome ID:79143)

1. Gene summary of enriched editing regions for MBOAT7

check button Gene summary
Gene informationGene symbol

MBOAT7

Gene ID

79143

GeneSynonymsBB1|LENG4|LPIAT|LPIAT1|LPLAT|LPLAT11|LRC4|MBOA7|MRT57|OACT7|hMBOA-7
GeneCytomap

19q13.42

GeneTypeprotein-coding
GeneDescriptionlysophospholipid acyltransferase 7|1-acylglycerophosphatidylinositol O-acyltransferase|LPLAT 7|bladder and breast carcinoma-overexpressed gene 1 protein|h-mboa-7|leukocyte receptor cluster (LRC) member 4|lyso-PI acyltransferase|lysophosphatidylinositol acyltransferase|lysophosphatidylinositol acyltransferase 1|lysophospholipid acyltransferase 11|malignant cell expression-enhanced gene/tumor progression-enhanced
GeneModificationdate20230517
UniprotIDC9J4E9;Q96N66;F8WD95;A9C4B8;H7C2M4;A0A0G2JNX6
PubMed ID

check buttonUCSC image.
all structure

check buttonLocations of each EERs.
EERENSTENSGGeneNameRegionRepeatdsRNA structure
chr19:54175593-54178232:-ENST00000494142.1ENSG00000125505.15MBOAT7ncRNA_intronicAluSx,FLAM_C,AluSx3,AluJr4,AluSc,(AATACT)n,AluSc5,MER20,AluYj4,AluSx1,AluY,MIRchr19:54175593-54178232:-.alignment
chr19:54184176-54185940:-ENST00000464098.4ENSG00000125505.15MBOAT7ncRNA_intronicAluSp,AluSx1,AluSx,AluJr,L2chr19:54184176-54185940:-.alignment
chr19:54184176-54185940:-ENST00000474910.4ENSG00000125505.15MBOAT7ncRNA_intronicAluSp,AluSx1,AluSx,AluJr,L2chr19:54184176-54185940:-.alignment


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2. Tumor-specific enriched editing regions for MBOAT7


all structure

check buttonComparison of enriched editing regions between tumor and normal.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
ID_eventscancerTypePBoxplot


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check buttonCorrelation of enriched editing regions with tumor stages.
* AnovaP<0.05, Pearson P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes, Path: Pathological stage, Cli: Clinical stage.
* Only shows the most significant correlation result of EERs/EAGs with either pathological stage or clinical stage according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeStageTypeAnovaPPRBoxplot


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check button Associations of enriched editing regions with cancer survival.
* Pkm<0.05 and Pcox<0.05.
* EER: enriched editing region, EAG: EER-associated genes.
ID_eventscancerTypeIDPkmPcox_continuousHR_continuousKMPlot

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3. Enriched editing regions and immune related genes for MBOAT7


all structure

check button Enriched editing regions and immune related genes.
* First, the associations between enriched editing regions and genes were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the gene relationships with immune were tested by three analyses: whether the gene is an immune gene (InnateDB、Immport、Immunome、Immunogenetic Related Information Source (IRIS)), whether the gene is associated with immune infiltration and whether the gene is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of genes with the fraction of different immune cells and the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeGenebetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark
chr19:54175593-54178232:-LAMLEERENSG00000154511,FAM69A0.43114.5867e-039.4778e-080.4311imageNNNAT_cells_CD4_memory_activatedGSVA_HALLMARK_FATTY_ACID_METABOLISM
chr19:54175593-54178232:-LAMLEERENSG00000143303,RRNAD1-0.41797.1075e-037.7614e-07-0.4020imageNNNADendritic_cells_activatedGSVA_HALLMARK_DNA_REPAIR
chr19:54175593-54178232:-LAMLEERENSG00000119318,RAD23B0.38291.6876e-023.5938e-070.4130imageNNRAD23BEosinophilsGSVA_HALLMARK_ANDROGEN_RESPONSE
chr19:54175593-54178232:-LAMLEERENSG00000118363,SPCS20.35313.4267e-027.3589e-070.4028imageNNNAT_cells_follicular_helperGSVA_HALLMARK_P53_PATHWAY
chr19:54175593-54178232:-LAMLEERENSG00000130208,APOC10.34693.5788e-026.0701e-070.4056imageNNAPOC1Macrophages_M1GSVA_HALLMARK_HEME_METABOLISM
chr19:54175593-54178232:-LAMLEERENSG00000252993,SNORA250.34373.6209e-024.2703e-070.4106imageNNNAT_cells_CD4_memory_activatedGSVA_HALLMARK_DNA_REPAIR

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4. Enriched editing regions and immune related splicing for MBOAT7


all structure

check button Enriched editing regions and immune related splicing.
* First, the associations between enriched editing regions and splicing events were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the splicing relationships with immune were tested by three analyses: whether the splicing event locates in an immune gene (InnateDB、Immport, Immunome and Immunogenetic Related Information Source (IRIS)), whether the splicing event is associated with immune infiltration and whether the splicing event is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of splicing events with the fraction of different immune cells and the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeSplicingTypeSplicingGeneSplicingChrSplicingPositionbetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark

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5. Enriched editing regions and immune infiltration for MBOAT7


all structure

check button Associations of enriched editing regions with immune infiltration.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the fraction of different immune cells according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeIDImmuneCellPRCorrelationPlot
chr19:54175593-54178232:-BLCAEERMacrophages_M11.3285e-050.2748image
ENSG00000125505.15,MBOAT7BLCAEAGB_cells_naive1.1688e-040.2394image
chr19:54175593-54178232:-BRCAEERDendritic_cells_resting1.4232e-030.1376image
chr19:54175593-54178232:-CESCEERNeutrophils3.1028e-020.1900image
ENSG00000125505.15,MBOAT7CESCEAGB_cells_naive2.5413e-020.1960image
ENSG00000125505.15,MBOAT7COADEAGDendritic_cells_activated1.8437e-030.3562image
chr19:54175593-54178232:-ESCAEERMacrophages_M24.3256e-020.1818image
chr19:54184176-54185940:-ESCAEERMacrophages_M15.1826e-030.4823image
ENSG00000125505.15,MBOAT7ESCAEAGMacrophages_M22.6846e-020.1927image
ENSG00000125505.15,MBOAT7GBMEAGDendritic_cells_activated1.5961e-03-0.4670image
ENSG00000125505.15,MBOAT7HNSCEAGT_cells_regulatory_(Tregs)2.9246e-020.3253image
chr19:54175593-54178232:-KIRCEERNeutrophils1.7633e-020.2958image
ENSG00000125505.15,MBOAT7KIRCEAGNeutrophils1.2594e-020.3011image
ENSG00000125505.15,MBOAT7KIRPEAGT_cells_CD4_naive2.3221e-02-0.3174image
chr19:54175593-54178232:-LAMLEERT_cells_CD4_memory_activated2.9145e-020.1838image
ENSG00000125505.15,MBOAT7LAMLEAGT_cells_CD4_memory_activated1.8867e-020.1976image
ENSG00000125505.15,MBOAT7LGGEAGT_cells_CD4_naive1.0052e-030.3466image
chr19:54175593-54178232:-LUADEERMonocytes9.6374e-03-0.1919image
ENSG00000125505.15,MBOAT7LUADEAGMonocytes9.0599e-03-0.1884image
ENSG00000125505.15,MBOAT7MESOEAGPlasma_cells1.9464e-020.4940image
chr19:54175593-54178232:-OVEERT_cells_CD84.1816e-030.2199image
ENSG00000125505.15,MBOAT7OVEAGT_cells_CD4_naive2.5717e-02-0.1691image
chr19:54175593-54178232:-PAADEERDendritic_cells_activated6.3399e-030.3303image
ENSG00000125505.15,MBOAT7PAADEAGDendritic_cells_activated8.2704e-030.3201image
chr19:54175593-54178232:-PCPGEERB_cells_naive2.4173e-020.3804image
ENSG00000125505.15,MBOAT7PCPGEAGMacrophages_M03.2971e-020.3467image
ENSG00000125505.15,MBOAT7PRADEAGPlasma_cells6.0181e-03-0.2813image
ENSG00000125505.15,MBOAT7READEAGMacrophages_M03.8294e-020.3935image
ENSG00000125505.15,MBOAT7SARCEAGDendritic_cells_resting2.2953e-020.4530image
ENSG00000125505.15,MBOAT7SKCMEAGMonocytes6.2278e-030.4664image
chr19:54175593-54178232:-STADEERMacrophages_M21.6643e-020.1735image
chr19:54184176-54185940:-STADEERT_cells_CD4_memory_activated3.4349e-030.3070image
chr19:54175593-54178232:-TGCTEERMacrophages_M23.3725e-02-0.2793image
chr19:54175593-54178232:-THCAEERT_cells_gamma_delta4.0004e-020.1720image
ENSG00000125505.15,MBOAT7THCAEAGT_cells_gamma_delta4.7834e-020.1613image
ENSG00000125505.15,MBOAT7UCECEAGT_cells_gamma_delta5.4467e-030.3545image


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6. Enriched editing regions and immune gene sets for MBOAT7


all structure

check button Correlation of enriched editing regions with epithelial-mesenchymal transition.
* First, the differences of enriched editing regions between Epi and Mes groups (defined by KS-test) were compared (P<0.05 and Informative number >=20).
* Second, the correlations between enriched editing regions and gene set score of HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the EERs/EAGs significantly edited between Epi and Mes group.
ID_eventscancerTypeE2M_PBoxplotCorPCorRCorrelationPlot


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check button Correlations of enriched editing regions with hypoxic.
* First, there are four hypoxia scores used in the database. The first three hypoxic scores were calculated on three gene sets of Buffa, Ragnum and Winter based on one previous study (PMID: 32024819). One last hypoxia score was defined on HALLMARK_HYPOXIA by GSVA method.
* Second, the correlations enriched editing regions with the four hypoxic scores were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the EERs/EAGs significantly correlated with all four hypoxia gene set scores. For more results, please go to download page.
ID_eventscancerTypeBuffa_P Buffa_R Ragnum_P Ragnum_R Winter_P Winter_R HALLMARK_P HALLMARK_R CorrelationPlot


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check button Associations of enriched editing regions with hallmark gene sets from MSigDB.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerHallmarkTypeTypePRCorrelationPlot
ENSG00000125505.15,MBOAT7ACCGSVA_HALLMARK_DNA_REPAIREAG4.0180e-02-0.3344image
chr19:54175593-54178232:-BLCAGSVA_HALLMARK_PANCREAS_BETA_CELLSEER8.6908e-100.3797image
ENSG00000125505.15,MBOAT7BLCAGSVA_HALLMARK_PANCREAS_BETA_CELLSEAG1.3269e-090.3688image
chr19:54175593-54178232:-BRCAGSVA_HALLMARK_ANDROGEN_RESPONSEEER4.5110e-050.1754image
ENSG00000125505.15,MBOAT7BRCAGSVA_HALLMARK_PROTEIN_SECRETIONEAG8.8452e-040.1406image
ENSG00000125505.15,MBOAT7COADGSVA_HALLMARK_SPERMATOGENESISEAG2.2619e-02-0.2648image
chr19:54175593-54178232:-ESCAGSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAYEER3.2943e-040.3173image
ENSG00000125505.15,MBOAT7ESCAGSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAYEAG2.0054e-030.2666image
chr19:54184176-54185940:-ESCAGSVA_HALLMARK_HEME_METABOLISMEER3.2422e-020.3790image
chr19:54175593-54178232:-GBMGSVA_HALLMARK_NOTCH_SIGNALINGEER2.5905e-020.3710image
ENSG00000125505.15,MBOAT7GBMGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEAG3.0262e-02-0.3308image
ENSG00000125505.15,MBOAT7HNSCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEAG1.5293e-02-0.3595image
chr19:54175593-54178232:-KIRCGSVA_HALLMARK_MITOTIC_SPINDLEEER4.3840e-030.3516image
ENSG00000125505.15,MBOAT7KIRCGSVA_HALLMARK_MITOTIC_SPINDLEEAG2.6200e-030.3593image
ENSG00000125505.15,MBOAT7KIRPGSVA_HALLMARK_MYOGENESISEAG2.4392e-040.4922image
ENSG00000125505.15,MBOAT7LAMLGSVA_HALLMARK_UV_RESPONSE_DNEAG4.7897e-030.2363image
chr19:54175593-54178232:-LAMLGSVA_HALLMARK_PANCREAS_BETA_CELLSEER6.0168e-030.2303image
ENSG00000125505.15,MBOAT7LGGGSVA_HALLMARK_COMPLEMENTEAG4.2529e-03-0.3036image
chr19:54175593-54178232:-LUADGSVA_HALLMARK_E2F_TARGETSEER1.5007e-020.1805image
ENSG00000125505.15,MBOAT7MESOGSVA_HALLMARK_DNA_REPAIREAG6.6152e-04-0.6691image
chr19:54175593-54178232:-OVGSVA_HALLMARK_ALLOGRAFT_REJECTIONEER1.2353e-050.3302image
ENSG00000125505.15,MBOAT7OVGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEAG2.7799e-040.2723image
chr19:54175593-54178232:-PAADGSVA_HALLMARK_UV_RESPONSE_DNEER1.9849e-02-0.2840image
ENSG00000125505.15,MBOAT7PAADGSVA_HALLMARK_MITOTIC_SPINDLEEAG1.3497e-02-0.3004image
chr19:54175593-54178232:-PCPGGSVA_HALLMARK_MITOTIC_SPINDLEEER2.8114e-020.3713image
ENSG00000125505.15,MBOAT7PRADGSVA_HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITIONEAG2.2122e-020.2358image
chr19:54175593-54178232:-STADGSVA_HALLMARK_UV_RESPONSE_UPEER2.8979e-030.2150image
ENSG00000125505.15,MBOAT7STADGSVA_HALLMARK_UV_RESPONSE_UPEAG8.3821e-040.2288image
chr19:54184176-54185940:-STADGSVA_HALLMARK_DNA_REPAIREER8.1569e-030.2788image
chr19:54175593-54178232:-TGCTGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER1.2570e-020.3258image
ENSG00000125505.15,MBOAT7THCAGSVA_HALLMARK_DNA_REPAIREAG4.7707e-020.1614image
ENSG00000125505.15,MBOAT7THYMGSVA_HALLMARK_BILE_ACID_METABOLISMEAG3.0222e-030.6281image
ENSG00000125505.15,MBOAT7UCECGSVA_HALLMARK_FATTY_ACID_METABOLISMEAG2.5847e-020.2876image


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7. Enriched editing regions and drugs for MBOAT7


all structure

check button Correlations between enriched editing regions and drug sensitivity.
* First, the drug sensitivity (IS50) was estimated on 84 drugs by pRRophetic package.
* Second, the correlations between editing enriched regions and drug sensitivity were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the IS50 scores of 84 drugs according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerDrugTypePRCorrelationPlot
ENSG00000125505.15,MBOAT7ACCGSK.650394EAG2.3917e-020.3658image
chr19:54175593-54178232:-ACCGW843682XEER1.4951e-020.3971image
chr19:54175593-54178232:-BLCACGP.082996EER1.4931e-07-0.3286image
ENSG00000125505.15,MBOAT7BLCACGP.082996EAG9.2675e-07-0.3021image
chr19:54175593-54178232:-BRCAEHT.1864EER2.0897e-020.0998image
ENSG00000125505.15,MBOAT7BRCAJNK.Inhibitor.VIIIEAG3.7947e-020.0880image
chr19:54175593-54178232:-CESCBX.795EER4.9707e-02-0.1732image
ENSG00000125505.15,MBOAT7CESCBX.795EAG4.2350e-02-0.1783image
ENSG00000125505.15,MBOAT7COADGSK.650394EAG1.9472e-030.3544image
chr19:54184176-54185940:-ESCAGSK.650394EER3.8509e-02-0.3675image
chr19:54175593-54178232:-ESCAMG.132EER1.3098e-02-0.2223image
ENSG00000125505.15,MBOAT7ESCABryostatin.1EAG1.4378e-02-0.2126image
ENSG00000125505.15,MBOAT7GBMFTI.277EAG1.7058e-02-0.3620image
ENSG00000125505.15,MBOAT7HNSCA.443654EAG1.4309e-020.3628image
chr19:54175593-54178232:-KIRCBAY.61.3606EER2.4776e-02-0.2805image
ENSG00000125505.15,MBOAT7KIRPA.770041EAG1.4248e-02-0.3446image
ENSG00000125505.15,MBOAT7LAMLFH535EAG1.7596e-050.3530image
chr19:54175593-54178232:-LAMLFTI.277EER3.7675e-050.3397image
ENSG00000125505.15,MBOAT7LGGBMS.754807EAG8.7207e-03-0.2796image
chr19:54175593-54178232:-LUADBexaroteneEER6.5335e-030.2015image
ENSG00000125505.15,MBOAT7LUADBexaroteneEAG5.3194e-030.2009image
chr19:54175593-54178232:-LUSCCI.1040EER2.7575e-02-0.1863image
ENSG00000125505.15,MBOAT7MESOFTI.277EAG1.6214e-040.7192image
ENSG00000125505.15,MBOAT7OVBMS.708163EAG1.2600e-04-0.2866image
chr19:54175593-54178232:-OVCI.1040EER1.8845e-05-0.3236image
chr19:54175593-54178232:-PAADATRAEER3.9369e-020.2543image
ENSG00000125505.15,MBOAT7PAADCGP.082996EAG4.6647e-020.2440image
chr19:54175593-54178232:-PCPGBMS.708163EER6.5001e-030.4513image
ENSG00000125505.15,MBOAT7PCPGBMS.708163EAG5.6848e-030.4402image
ENSG00000125505.15,MBOAT7PRADDasatinibEAG1.9657e-02-0.2429image
ENSG00000125505.15,MBOAT7SARCAICAREAG1.5242e-02-0.4797image
ENSG00000125505.15,MBOAT7SKCMFTI.277EAG2.4867e-03-0.5090image
ENSG00000125505.15,MBOAT7STADGW.441756EAG2.8054e-02-0.1516image
chr19:54184176-54185940:-STADDocetaxelEER5.7291e-03-0.2906image
ENSG00000125505.15,MBOAT7TGCTCamptothecinEAG5.3119e-04-0.4242image
chr19:54175593-54178232:-TGCTCamptothecinEER2.7516e-04-0.4605image
ENSG00000125505.15,MBOAT7THCABX.795EAG3.8230e-020.1688image
chr19:54175593-54178232:-THCABX.795EER1.5108e-020.2028image
ENSG00000125505.15,MBOAT7UCECEHT.1864EAG8.6579e-03-0.3361image


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check button EAGs targeted by drugs from DrugBank database.
* EAG: EER-associated genes.
EERENSTUniprotIDDrugBankIDDrugDrugType