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Center for Computational Systems Medicine
Soverview

1. Gene summary of enriched editing regions

Soverview

2. Tumor-specific enriched editing regions

Comparison of enriched editing regions between tumor and normal.

Correlation of enriched editing regions with tumor stages.

Associations of enriched editing regions with cancer survival.

Soverview

3. Enriched editing regions and immune related genes

Soverview

4. Enriched editing regions and immune related splicing

Soverview

5. Enriched editing regions and immune infiltration

Soverview

6. Enriched editing regions and immune gene sets

Correlation of enriched editing regions with epithelial-mesenchymal transition.

Correlations of enriched editing regions with hypoxic.

Associations of enriched editing regions with hallmark gene sets from MSigDB.

Soverview

7. Enriched editing regions and drugs

Correlations between enriched editing regions and drug sensitivity.

Enriched editing regions targeted by drugs from DrugBank database.

Editing gene: PEX26 (ImmuneEditome ID:55670)

1. Gene summary of enriched editing regions for PEX26

check button Gene summary
Gene informationGene symbol

PEX26

Gene ID

55670

GeneSynonymsPBD7A|PBD7B|PEX26M1T|Pex26pM1T
GeneCytomap

22q11.21

GeneTypeprotein-coding
GeneDescriptionperoxisome assembly protein 26|peroxin-26|peroxisome biogenesis disorder, complementation group 8|peroxisome biogenesis disorder, complementation group A|peroxisome biogenesis factor 26
GeneModificationdate20230329
UniprotIDQ7Z412;A0A024R100;A0A0S2Z5M7
PubMed ID

check buttonUCSC image.
all structure

check buttonLocations of each EERs.
EERENSTENSGGeneNameRegionRepeatdsRNA structure
chr22:18088466-18090013:+ENST00000329627.10ENSG00000215193.11PEX26UTR3AluSz,AluYf1chr22:18088466-18090013:+.alignment
chr22:18088466-18090013:+ENST00000610387.3ENSG00000215193.11PEX26UTR3AluSz,AluYf1chr22:18088466-18090013:+.alignment
chr22:18091334-18094525:+ENST00000329627.10ENSG00000215193.11PEX26UTR3AluSq2,AluJo,L1ME4a,AluY,(CCTC)nchr22:18091334-18094525:+.alignment
chr22:18095818-18098683:+ENST00000329627.10ENSG00000215193.11PEX26UTR3AluSg,AluSz,MIRc,THE1D,L1ME4b,AluSz6,FLAM_C,MIR,AluYchr22:18095818-18098683:+.alignment
chr22:18100091-18100385:+ENST00000329627.10ENSG00000215193.11PEX26UTR3AluSq2chr22:18100091-18100385:+.alignment


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2. Tumor-specific enriched editing regions for PEX26


all structure

check buttonComparison of enriched editing regions between tumor and normal.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
ID_eventscancerTypePBoxplot
chr22:18088466-18090013:+BRCAEER1.3852e-22image
ENSG00000215193.11,PEX26BRCAEAG7.6330e-20image
ENSG00000215193.11,PEX26COADEAG5.1652e-23image
chr22:18088466-18090013:+HNSCEER1.1393e-08image
ENSG00000215193.11,PEX26HNSCEAG2.0202e-05image
ENSG00000215193.11,PEX26KIRCEAG1.5235e-03image
ENSG00000215193.11,PEX26PRADEAG7.1049e-06image
chr22:18088466-18090013:+STADEER1.6817e-03image
ENSG00000215193.11,PEX26STADEAG1.0899e-02image
chr22:18095818-18098683:+THCAEER1.1881e-03image
ENSG00000215193.11,PEX26UCECEAG4.4572e-02image


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check buttonCorrelation of enriched editing regions with tumor stages.
* AnovaP<0.05, Pearson P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes, Path: Pathological stage, Cli: Clinical stage.
* Only shows the most significant correlation result of EERs/EAGs with either pathological stage or clinical stage according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeStageTypeAnovaPPRBoxplot
ENSG00000215193.11,PEX26KIRCPathEAG2.2200e-024.9731e-030.1216image
chr22:18091334-18094525:+KIRPPathEER3.1901e-021.3185e-020.2161image
chr22:18095818-18098683:+LUADPathEER3.6954e-021.2159e-020.1887image


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check button Associations of enriched editing regions with cancer survival.
* Pkm<0.05 and Pcox<0.05.
* EER: enriched editing region, EAG: EER-associated genes.
ID_eventscancerTypeIDPkmPcox_continuousHR_continuousKMPlot
chr22:18088466-18090013:+ESCAEER3.8599e-022.2430e-023.2762e+04image
ENSG00000215193.11,PEX26UVMEAG9.6261e-032.4407e-024.8983e-07image

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3. Enriched editing regions and immune related genes for PEX26


all structure

check button Enriched editing regions and immune related genes.
* First, the associations between enriched editing regions and genes were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the gene relationships with immune were tested by three analyses: whether the gene is an immune gene (InnateDB、Immport、Immunome、Immunogenetic Related Information Source (IRIS)), whether the gene is associated with immune infiltration and whether the gene is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of genes with the fraction of different immune cells and the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeGenebetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark
chr22:18088466-18090013:+BRCAEERENSG00000116586,LAMTOR20.38012.6872e-343.6398e-520.4398imageNEIF4A3;ELAVL1;FBL;HNRNPA1;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_CD4_memory_restingGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATION
chr22:18088466-18090013:+BRCAEERENSG00000163463,KRTCAP20.36769.9438e-324.5623e-440.4063imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_CD4_memory_restingGSVA_HALLMARK_UV_RESPONSE_DN
chr22:18088466-18090013:+BRCAEERENSG00000130731,C16orf130.36472.6114e-317.6206e-520.4386imageNBCCIP;DKC1;EIF4A3;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_UV_RESPONSE_DN
chr22:18088466-18090013:+BRCAEERENSG00000103363,TCEB20.34341.2074e-271.3517e-430.4042imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2TCEB2T_cells_CD4_memory_restingGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000170906,NDUFA30.34381.6353e-275.0784e-510.4353imageNBCCIP;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_regulatory_(Tregs)GSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000205155,PSENEN0.34184.3826e-274.6392e-450.4106imageNBCCIP;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2PSENENT_cells_CD4_memory_restingGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000131495,NDUFA20.33068.7500e-261.8500e-440.4080imageNBCCIP;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000005075,POLR2J0.33369.2220e-265.2141e-480.4231imageNBCCIP;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_CD4_memory_restingGSVA_HALLMARK_UV_RESPONSE_DN
chr22:18088466-18090013:+BRCAEERENSG00000135441,BLOC1S10.32183.9042e-243.9508e-490.4277imageNDKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2BLOC1S1NK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000166337,TAF100.32061.0144e-232.0147e-440.4078imageNBCCIP;EIF4A3;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_regulatory_(Tregs)GSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000116586,LAMTOR20.38012.6872e-343.6398e-520.4398imageNEIF4A3;ELAVL1;FBL;HNRNPA1;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_CD4_memory_restingGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATION
chr22:18088466-18090013:+BRCAEERENSG00000163463,KRTCAP20.36769.9438e-324.5623e-440.4063imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_CD4_memory_restingGSVA_HALLMARK_UV_RESPONSE_DN
chr22:18088466-18090013:+BRCAEERENSG00000130731,C16orf130.36472.6114e-317.6206e-520.4386imageNBCCIP;DKC1;EIF4A3;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_UV_RESPONSE_DN
chr22:18088466-18090013:+BRCAEERENSG00000103363,TCEB20.34341.2074e-271.3517e-430.4042imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2TCEB2T_cells_CD4_memory_restingGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000170906,NDUFA30.34381.6353e-275.0784e-510.4353imageNBCCIP;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_regulatory_(Tregs)GSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000205155,PSENEN0.34184.3826e-274.6392e-450.4106imageNBCCIP;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2PSENENT_cells_CD4_memory_restingGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000131495,NDUFA20.33068.7500e-261.8500e-440.4080imageNBCCIP;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000005075,POLR2J0.33369.2220e-265.2141e-480.4231imageNBCCIP;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_CD4_memory_restingGSVA_HALLMARK_UV_RESPONSE_DN
chr22:18088466-18090013:+BRCAEERENSG00000135441,BLOC1S10.32183.9042e-243.9508e-490.4277imageNDKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2BLOC1S1NK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+BRCAEERENSG00000166337,TAF100.32061.0144e-232.0147e-440.4078imageNBCCIP;EIF4A3;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NAT_cells_regulatory_(Tregs)GSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18095818-18098683:+ESCAEERENSG00000128191,DGCR8-0.46131.8757e-052.2227e-08-0.4245imageNACIN1;BUD13;CPSF6;CSTF2T;DDX54;DHX9;EIF4A3;EIF4G2;ELAVL1;FBL;FMR1;FUS;FXR1;FXR2;GNL3;HNRNPA2B1;HNRNPC;IGF2BP1;IGF2BP2;IGF2BP3;LIN28B;MOV10;MSI2;NOP56;NOP58;PRPF8;PTBP1;RBFOX2;RBM10;SAFB2;SF3A3;SND1;SRSF1;SRSF10;TARDBP;TRA2A;U2AF2;UPF1;YWHAG;ZNF184DGCR8Macrophages_M2GSVA_HALLMARK_COMPLEMENT

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4. Enriched editing regions and immune related splicing for PEX26


all structure

check button Enriched editing regions and immune related splicing.
* First, the associations between enriched editing regions and splicing events were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the splicing relationships with immune were tested by three analyses: whether the splicing event locates in an immune gene (InnateDB、Immport, Immunome and Immunogenetic Related Information Source (IRIS)), whether the splicing event is associated with immune infiltration and whether the splicing event is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of splicing events with the fraction of different immune cells and the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeSplicingTypeSplicingGeneSplicingChrSplicingPositionbetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154399945:154400474:154400626:154400701:154400811-0.30511.9604e-207.3651e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154399945:154400563:154400626:154400701:154400811-0.30511.9604e-207.3651e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154399945:154400497:154400626:154400701:154400811-0.30511.9604e-207.4037e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154399917:154400563:154400626:154400701:154400917-0.30511.9604e-207.3653e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154399925:154400474:154400626:154400701:154400917-0.30511.9604e-207.3678e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154399925:154400563:154400626:154400701:154400917-0.30511.9604e-207.3678e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154400358:154400474:154400626:154400701:154400913-0.30511.9604e-207.3678e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154400358:154400563:154400626:154400701:154400913-0.30511.9604e-207.3678e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154399917:154400497:154400626:154400701:154400917-0.30511.9604e-207.4038e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE
chr22:18088466-18090013:+
BRCAEERMEXENSG00000147403.12chrX154399486:154399594:154399802:154399925:154400497:154400626:154400701:154400917-0.30511.9604e-207.4063e-44-0.4054imageNBCCIP;DKC1;EIF4A3;ELAVL1;FBL;HNRNPA1;HNRNPM;IGF2BP2;NOP56;NOP58;RBFOX2;TAF15;TARDBP;U2AF2NANK_cells_activatedGSVA_HALLMARK_MITOTIC_SPINDLE

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5. Enriched editing regions and immune infiltration for PEX26


all structure

check button Associations of enriched editing regions with immune infiltration.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the fraction of different immune cells according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeIDImmuneCellPRCorrelationPlot
ENSG00000215193.11,PEX26ACCEAGNK_cells_activated7.2959e-030.3095image
chr22:18091334-18094525:+BLCAEERT_cells_CD4_memory_resting4.8753e-02-0.2007image
chr22:18095818-18098683:+BLCAEERMacrophages_M11.0859e-020.2088image
ENSG00000215193.11,PEX26BLCAEAGDendritic_cells_activated4.2111e-03-0.1419image
chr22:18088466-18090013:+BRCAEERNK_cells_activated5.7107e-110.1979image
chr22:18095818-18098683:+BRCAEERMast_cells_resting2.6788e-02-0.1027image
ENSG00000215193.11,PEX26BRCAEAGNK_cells_activated3.1795e-080.1675image
chr22:18088466-18090013:+CESCEERT_cells_follicular_helper2.3791e-030.1754image
ENSG00000215193.11,PEX26CESCEAGT_cells_follicular_helper1.0058e-020.1474image
chr22:18095818-18098683:+CHOLEERT_cells_CD4_memory_activated1.8929e-020.4191image
ENSG00000215193.11,PEX26CHOLEAGB_cells_naive3.4737e-02-0.3580image
ENSG00000215193.11,PEX26COADEAGNK_cells_activated1.0802e-040.2326image
chr22:18088466-18090013:+DLBCEERMacrophages_M21.4244e-030.4566image
ENSG00000215193.11,PEX26DLBCEAGMacrophages_M21.4714e-030.4508image
chr22:18088466-18090013:+ESCAEERT_cells_CD86.5526e-040.2658image
chr22:18091334-18094525:+ESCAEERT_cells_CD81.2865e-030.2563image
chr22:18095818-18098683:+ESCAEERT_cells_CD4_memory_resting3.2172e-02-0.1695image
ENSG00000215193.11,PEX26ESCAEAGT_cells_CD88.2746e-050.3052image
chr22:18091334-18094525:+GBMEERT_cells_CD81.1401e-020.2732image
ENSG00000215193.11,PEX26GBMEAGPlasma_cells1.2799e-020.1940image
chr22:18088466-18090013:+HNSCEERT_cells_CD82.3376e-050.1893image
chr22:18091334-18094525:+HNSCEERB_cells_naive7.9728e-03-0.2005image
ENSG00000215193.11,PEX26HNSCEAGT_cells_CD81.9783e-050.1903image
chr22:18088466-18090013:+KICHEERT_cells_regulatory_(Tregs)1.0835e-02-0.3141image
chr22:18091334-18094525:+KICHEERMacrophages_M22.5242e-030.4820image
ENSG00000215193.11,PEX26KICHEAGT_cells_regulatory_(Tregs)2.9479e-02-0.2702image
chr22:18091334-18094525:+KIRCEERPlasma_cells4.9363e-030.1938image
chr22:18095818-18098683:+KIRCEERMacrophages_M27.6047e-04-0.2508image
ENSG00000215193.11,PEX26KIRCEAGMast_cells_resting3.5757e-03-0.1481image
ENSG00000215193.11,PEX26KIRPEAGB_cells_memory3.8805e-020.1220image
chr22:18095818-18098683:+LAMLEERB_cells_memory2.7916e-02-0.1936image
ENSG00000215193.11,PEX26LAMLEAGNeutrophils7.3684e-030.2180image
chr22:18095818-18098683:+LGGEERT_cells_CD83.4925e-02-0.1180image
ENSG00000215193.11,PEX26LGGEAGMacrophages_M22.1940e-030.1329image
chr22:18088466-18090013:+LIHCEERT_cells_CD4_memory_activated2.3420e-020.1213image
chr22:18095818-18098683:+LIHCEERNK_cells_activated4.1152e-020.2207image
ENSG00000215193.11,PEX26LIHCEAGT_cells_CD4_memory_activated2.7712e-020.1160image
chr22:18088466-18090013:+LUADEERT_cells_regulatory_(Tregs)6.2161e-040.1516image
ENSG00000215193.11,PEX26LUADEAGEosinophils5.5304e-040.1526image
chr22:18091334-18094525:+LUSCEERNK_cells_resting1.6094e-02-0.1582image
chr22:18095818-18098683:+LUSCEERT_cells_CD4_memory_activated6.7874e-030.1644image
ENSG00000215193.11,PEX26LUSCEAGT_cells_CD81.7203e-050.1915image
ENSG00000215193.11,PEX26MESOEAGT_cells_gamma_delta2.9788e-020.2416image
chr22:18088466-18090013:+OVEERT_cells_CD84.7980e-050.2364image
chr22:18091334-18094525:+OVEEREosinophils4.1071e-020.1382image
chr22:18095818-18098683:+OVEERNeutrophils4.3710e-020.1340image
ENSG00000215193.11,PEX26OVEAGT_cells_CD83.4559e-050.2402image
ENSG00000215193.11,PEX26PAADEAGT_cells_follicular_helper4.1815e-030.2137image
chr22:18095818-18098683:+PCPGEERMast_cells_resting4.9346e-02-0.2055image
ENSG00000215193.11,PEX26PCPGEAGPlasma_cells1.2625e-020.1846image
ENSG00000215193.11,PEX26PRADEAGT_cells_regulatory_(Tregs)3.4486e-060.2061image
chr22:18095818-18098683:+SARCEERMacrophages_M14.9593e-020.2137image
ENSG00000215193.11,PEX26SARCEAGT_cells_gamma_delta5.3017e-050.2503image
chr22:18091334-18094525:+SKCMEERMonocytes3.2002e-030.1711image
chr22:18095818-18098683:+SKCMEERMacrophages_M04.6085e-03-0.1827image
ENSG00000215193.11,PEX26SKCMEAGT_cells_CD87.6510e-060.2048image
chr22:18088466-18090013:+STADEERT_cells_CD4_memory_resting4.1780e-04-0.1835image
chr22:18095818-18098683:+STADEERT_cells_CD81.1185e-040.2101image
ENSG00000215193.11,PEX26STADEAGT_cells_CD4_memory_activated8.7157e-040.1730image
chr22:18095818-18098683:+TGCTEERMacrophages_M24.1627e-02-0.3050image
ENSG00000215193.11,PEX26TGCTEAGMacrophages_M23.8142e-03-0.2318image
chr22:18091334-18094525:+THCAEERMonocytes2.7820e-02-0.1288image
ENSG00000215193.11,PEX26THCAEAGPlasma_cells2.1376e-030.1365image
chr22:18095818-18098683:+THYMEERT_cells_gamma_delta1.5346e-020.2908image
ENSG00000215193.11,PEX26THYMEAGT_cells_gamma_delta7.1000e-030.2466image
chr22:18091334-18094525:+UCECEEREosinophils2.2114e-02-0.3332image
chr22:18095818-18098683:+UCECEERDendritic_cells_activated9.7056e-030.3901image
ENSG00000215193.11,PEX26UCECEAGB_cells_naive3.3093e-03-0.2215image
ENSG00000215193.11,PEX26UCSEAGEosinophils7.9603e-080.6452image
ENSG00000215193.11,PEX26UVMEAGT_cells_CD4_memory_activated1.2389e-020.2784image


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6. Enriched editing regions and immune gene sets for PEX26


all structure

check button Correlation of enriched editing regions with epithelial-mesenchymal transition.
* First, the differences of enriched editing regions between Epi and Mes groups (defined by KS-test) were compared (P<0.05 and Informative number >=20).
* Second, the correlations between enriched editing regions and gene set score of HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the EERs/EAGs significantly edited between Epi and Mes group.
ID_eventscancerTypeE2M_PBoxplotCorPCorRCorrelationPlot
chr22:18088466-18090013:+BRCAEER1.9847e-04image4.1022e-05-0.1246image
ENSG00000215193.11,PEX26BRCAEAG3.2948e-04image1.7420e-03-0.0953image


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check button Correlations of enriched editing regions with hypoxic.
* First, there are four hypoxia scores used in the database. The first three hypoxic scores were calculated on three gene sets of Buffa, Ragnum and Winter based on one previous study (PMID: 32024819). One last hypoxia score was defined on HALLMARK_HYPOXIA by GSVA method.
* Second, the correlations enriched editing regions with the four hypoxic scores were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the EERs/EAGs significantly correlated with all four hypoxia gene set scores. For more results, please go to download page.
ID_eventscancerTypeBuffa_P Buffa_R Ragnum_P Ragnum_R Winter_P Winter_R HALLMARK_P HALLMARK_R CorrelationPlot


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check button Associations of enriched editing regions with hallmark gene sets from MSigDB.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerHallmarkTypeTypePRCorrelationPlot
ENSG00000215193.11,PEX26ACCGSVA_HALLMARK_MITOTIC_SPINDLEEAG1.3889e-05-0.4818image
chr22:18095818-18098683:+BLCAGSVA_HALLMARK_KRAS_SIGNALING_DNEER1.8574e-030.2538image
chr22:18091334-18094525:+BLCAGSVA_HALLMARK_TGF_BETA_SIGNALINGEER2.6012e-02-0.2260image
ENSG00000215193.11,PEX26BLCAGSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAYEAG9.3199e-070.2409image
chr22:18095818-18098683:+BRCAGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER5.3363e-060.2093image
chr22:18091334-18094525:+BRCAGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEER4.5458e-030.1273image
ENSG00000215193.11,PEX26BRCAGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEAG7.4080e-220.2868image
chr22:18088466-18090013:+BRCAGSVA_HALLMARK_UV_RESPONSE_DNEER1.8336e-24-0.3040image
chr22:18088466-18090013:+CESCGSVA_HALLMARK_MITOTIC_SPINDLEEER2.0778e-07-0.2953image
ENSG00000215193.11,PEX26CESCGSVA_HALLMARK_MITOTIC_SPINDLEEAG1.1690e-04-0.2192image
chr22:18095818-18098683:+CESCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER3.0180e-030.3060image
chr22:18095818-18098683:+CHOLGSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAYEER1.9363e-02-0.4178image
chr22:18095818-18098683:+COADGSVA_HALLMARK_TNFA_SIGNALING_VIA_NFKBEER6.1294e-030.2750image
ENSG00000215193.11,PEX26COADGSVA_HALLMARK_PROTEIN_SECRETIONEAG2.4196e-04-0.2208image
chr22:18088466-18090013:+DLBCGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALINGEER4.5851e-03-0.4107image
ENSG00000215193.11,PEX26DLBCGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALINGEAG1.8308e-03-0.4428image
chr22:18091334-18094525:+ESCAGSVA_HALLMARK_ESTROGEN_RESPONSE_EARLYEER2.9515e-03-0.2373image
chr22:18095818-18098683:+ESCAGSVA_HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITIONEER1.6327e-020.1896image
ENSG00000215193.11,PEX26ESCAGSVA_HALLMARK_BILE_ACID_METABOLISMEAG3.5367e-03-0.2286image
chr22:18088466-18090013:+ESCAGSVA_HALLMARK_BILE_ACID_METABOLISMEER2.6183e-04-0.2840image
chr22:18091334-18094525:+GBMGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER1.0435e-02-0.2764image
ENSG00000215193.11,PEX26GBMGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALINGEAG7.9904e-04-0.2593image
chr22:18095818-18098683:+HNSCGSVA_HALLMARK_TNFA_SIGNALING_VIA_NFKBEER2.0809e-020.2144image
chr22:18091334-18094525:+HNSCGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALINGEER4.9521e-02-0.1491image
ENSG00000215193.11,PEX26HNSCGSVA_HALLMARK_MITOTIC_SPINDLEEAG7.5017e-18-0.3733image
chr22:18088466-18090013:+HNSCGSVA_HALLMARK_MITOTIC_SPINDLEEER4.0588e-17-0.3665image
chr22:18088466-18090013:+KICHGSVA_HALLMARK_ANDROGEN_RESPONSEEER3.0917e-04-0.4335image
ENSG00000215193.11,PEX26KICHGSVA_HALLMARK_ANDROGEN_RESPONSEEAG9.6359e-04-0.4000image
chr22:18091334-18094525:+KICHGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEER7.7640e-03-0.4309image
ENSG00000215193.11,PEX26KIRCGSVA_HALLMARK_MITOTIC_SPINDLEEAG5.5955e-05-0.2038image
chr22:18095818-18098683:+KIRCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER3.2038e-050.3072image
ENSG00000215193.11,PEX26KIRPGSVA_HALLMARK_PROTEIN_SECRETIONEAG3.3956e-13-0.4121image
chr22:18095818-18098683:+KIRPGSVA_HALLMARK_PANCREAS_BETA_CELLSEER1.3392e-020.2071image
chr22:18091334-18094525:+KIRPGSVA_HALLMARK_BILE_ACID_METABOLISMEER1.1361e-02-0.2111image
chr22:18095818-18098683:+LAMLGSVA_HALLMARK_PEROXISOMEEER8.1847e-03-0.2319image
ENSG00000215193.11,PEX26LAMLGSVA_HALLMARK_PEROXISOMEEAG1.2424e-03-0.2612image
ENSG00000215193.11,PEX26LGGGSVA_HALLMARK_HEDGEHOG_SIGNALINGEAG1.6381e-10-0.2732image
chr22:18095818-18098683:+LGGGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEER2.4309e-020.1259image
ENSG00000215193.11,PEX26LIHCGSVA_HALLMARK_UV_RESPONSE_DNEAG1.2808e-09-0.3129image
chr22:18088466-18090013:+LIHCGSVA_HALLMARK_UV_RESPONSE_DNEER5.1874e-11-0.3420image
chr22:18091334-18094525:+LIHCGSVA_HALLMARK_IL6_JAK_STAT3_SIGNALINGEER5.0134e-030.2785image
ENSG00000215193.11,PEX26LUADGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEAG2.4240e-060.2072image
chr22:18095818-18098683:+LUADGSVA_HALLMARK_TNFA_SIGNALING_VIA_NFKBEER2.5440e-030.2287image
chr22:18088466-18090013:+LUADGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEER1.1252e-070.2332image
chr22:18091334-18094525:+LUSCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER1.2819e-020.1635image
chr22:18095818-18098683:+LUSCGSVA_HALLMARK_TNFA_SIGNALING_VIA_NFKBEER7.9917e-040.2029image
ENSG00000215193.11,PEX26LUSCGSVA_HALLMARK_HEDGEHOG_SIGNALINGEAG5.3255e-04-0.1548image
ENSG00000215193.11,PEX26MESOGSVA_HALLMARK_PANCREAS_BETA_CELLSEAG3.7726e-020.2313image
chr22:18095818-18098683:+OVGSVA_HALLMARK_APOPTOSISEER2.4170e-020.1496image
chr22:18091334-18094525:+OVGSVA_HALLMARK_SPERMATOGENESISEER2.0913e-020.1560image
chr22:18088466-18090013:+OVGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALINGEER5.5746e-15-0.4374image
ENSG00000215193.11,PEX26OVGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEAG1.6170e-110.3815image
ENSG00000215193.11,PEX26PAADGSVA_HALLMARK_MITOTIC_SPINDLEEAG2.0563e-04-0.2748image
chr22:18095818-18098683:+PCPGGSVA_HALLMARK_BILE_ACID_METABOLISMEER1.7103e-070.5130image
ENSG00000215193.11,PEX26PCPGGSVA_HALLMARK_MITOTIC_SPINDLEEAG1.2037e-06-0.3508image
ENSG00000215193.11,PEX26PRADGSVA_HALLMARK_PROTEIN_SECRETIONEAG2.3939e-11-0.2932image
ENSG00000215193.11,PEX26READGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALINGEAG4.3287e-03-0.2902image
ENSG00000215193.11,PEX26SARCGSVA_HALLMARK_XENOBIOTIC_METABOLISMEAG5.0666e-050.2509image
chr22:18095818-18098683:+SARCGSVA_HALLMARK_HEDGEHOG_SIGNALINGEER5.8343e-03-0.2967image
chr22:18095818-18098683:+SKCMGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEER2.1172e-030.1979image
ENSG00000215193.11,PEX26SKCMGSVA_HALLMARK_ANDROGEN_RESPONSEEAG1.6882e-12-0.3179image
chr22:18091334-18094525:+STADGSVA_HALLMARK_MITOTIC_SPINDLEEER1.3692e-02-0.1432image
chr22:18088466-18090013:+STADGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER3.3083e-040.1866image
chr22:18095818-18098683:+STADGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER4.8796e-050.2206image
ENSG00000215193.11,PEX26STADGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEAG2.3213e-040.1910image
chr22:18095818-18098683:+TGCTGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER1.0340e-020.3786image
ENSG00000215193.11,PEX26TGCTGSVA_HALLMARK_MITOTIC_SPINDLEEAG4.0504e-08-0.4246image
chr22:18095818-18098683:+THCAGSVA_HALLMARK_APOPTOSISEER1.7411e-040.2381image
ENSG00000215193.11,PEX26THCAGSVA_HALLMARK_UV_RESPONSE_DNEAG5.4201e-15-0.3387image
chr22:18091334-18094525:+THCAGSVA_HALLMARK_MYOGENESISEER2.5246e-030.1761image
ENSG00000215193.11,PEX26THYMGSVA_HALLMARK_P53_PATHWAYEAG8.3169e-050.3542image
chr22:18095818-18098683:+THYMGSVA_HALLMARK_CHOLESTEROL_HOMEOSTASISEER8.0183e-030.3167image
chr22:18091334-18094525:+UCECGSVA_HALLMARK_UV_RESPONSE_DNEER2.2129e-04-0.5137image
chr22:18095818-18098683:+UCECGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER6.4663e-030.4090image
ENSG00000215193.11,PEX26UCECGSVA_HALLMARK_MITOTIC_SPINDLEEAG1.3642e-05-0.3232image
ENSG00000215193.11,PEX26UVMGSVA_HALLMARK_COAGULATIONEAG1.8809e-030.3424image


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7. Enriched editing regions and drugs for PEX26


all structure

check button Correlations between enriched editing regions and drug sensitivity.
* First, the drug sensitivity (IS50) was estimated on 84 drugs by pRRophetic package.
* Second, the correlations between editing enriched regions and drug sensitivity were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the IS50 scores of 84 drugs according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerDrugTypePRCorrelationPlot
ENSG00000215193.11,PEX26ACCLFM.A13EAG3.2153e-04-0.4069image
chr22:18095818-18098683:+BLCACMKEER2.8404e-05-0.3368image
chr22:18091334-18094525:+BLCAAZD6482EER6.5519e-050.3939image
ENSG00000215193.11,PEX26BLCACCT007093EAG1.8899e-060.2342image
chr22:18088466-18090013:+BRCAAZD6482EER6.1509e-170.2514image
ENSG00000215193.11,PEX26BRCAAZD6482EAG1.3125e-120.2141image
chr22:18091334-18094525:+BRCADMOGEER9.1034e-040.1486image
chr22:18095818-18098683:+BRCAABT.263EER1.0622e-030.1517image
chr22:18088466-18090013:+CESCAZD6482EER1.3541e-060.2756image
chr22:18095818-18098683:+CESCGDC.0449EER1.9934e-02-0.2423image
ENSG00000215193.11,PEX26CESCBMS.536924EAG8.7454e-06-0.2527image
ENSG00000215193.11,PEX26CHOLAKT.inhibitor.VIIIEAG2.8454e-02-0.3705image
chr22:18095818-18098683:+CHOLAG.014699EER2.6243e-02-0.3989image
chr22:18095818-18098683:+COADCMKEER1.1194e-020.2552image
ENSG00000215193.11,PEX26COADCisplatinEAG4.7427e-03-0.1708image
ENSG00000215193.11,PEX26DLBCATRAEAG4.3006e-030.4091image
chr22:18088466-18090013:+DLBCAICAREER1.9828e-030.4442image
chr22:18088466-18090013:+ESCAAZD.2281EER3.5396e-03-0.2293image
ENSG00000215193.11,PEX26ESCAAZD.2281EAG3.5805e-04-0.2787image
chr22:18091334-18094525:+ESCAGDC.0449EER9.7587e-04-0.2623image
chr22:18095818-18098683:+ESCAAZ628EER2.2776e-05-0.3281image
ENSG00000215193.11,PEX26GBMBIBW2992EAG3.1501e-04-0.2779image
chr22:18091334-18094525:+GBMCCT018159EER1.8473e-020.2551image
ENSG00000215193.11,PEX26HNSCBMS.536924EAG4.0451e-22-0.4158image
chr22:18091334-18094525:+HNSCABT.263EER2.7702e-020.1674image
chr22:18088466-18090013:+HNSCBMS.536924EER7.7686e-23-0.4231image
chr22:18088466-18090013:+KICHAZD.2281EER1.5328e-04-0.4526image
ENSG00000215193.11,PEX26KICHABT.263EAG6.6756e-030.3332image
chr22:18091334-18094525:+KICHFH535EER5.0090e-030.4517image
chr22:18091334-18094525:+KIRCCEP.701EER3.5324e-04-0.2448image
ENSG00000215193.11,PEX26KIRCAZD6244EAG1.6905e-06-0.2412image
chr22:18095818-18098683:+KIRCCisplatinEER7.9314e-04-0.2500image
ENSG00000215193.11,PEX26KIRPAZD6482EAG4.8246e-120.3931image
chr22:18095818-18098683:+KIRPA.770041EER1.7389e-02-0.1993image
chr22:18091334-18094525:+KIRPAS601245EER8.9913e-030.2177image
chr22:18095818-18098683:+LAMLEmbelinEER7.4146e-030.2347image
ENSG00000215193.11,PEX26LAMLFTI.277EAG4.3655e-030.2315image
ENSG00000215193.11,PEX26LGGGNF.2EAG4.1411e-10-0.2673image
chr22:18095818-18098683:+LGGBI.2536EER1.0924e-020.1421image
chr22:18088466-18090013:+LIHCBAY.61.3606EER3.4209e-070.2688image
chr22:18091334-18094525:+LIHCCGP.60474EER6.5875e-03-0.2700image
chr22:18095818-18098683:+LIHCABT.263EER2.6931e-020.2386image
ENSG00000215193.11,PEX26LIHCImatinibEAG6.4485e-060.2352image
chr22:18095818-18098683:+LUADGemcitabineEER2.2497e-02-0.1739image
chr22:18088466-18090013:+LUADBMS.536924EER1.1757e-06-0.2149image
ENSG00000215193.11,PEX26LUADBMS.536924EAG1.3437e-05-0.1924image
chr22:18095818-18098683:+LUSCCGP.60474EER6.7950e-04-0.2055image
ENSG00000215193.11,PEX26LUSCAP.24534EAG2.1258e-060.2108image
chr22:18091334-18094525:+LUSCKU.55933EER1.5152e-02-0.1596image
ENSG00000215193.11,PEX26MESOGDC0941EAG4.7666e-02-0.2208image
chr22:18088466-18090013:+OVEmbelinEER2.8225e-180.4820image
ENSG00000215193.11,PEX26OVBexaroteneEAG1.4551e-140.4306image
chr22:18091334-18094525:+OVDMOGEER8.2077e-030.1782image
chr22:18095818-18098683:+OVABT.263EER1.1445e-020.1676image
ENSG00000215193.11,PEX26PAADAKT.inhibitor.VIIIEAG1.8902e-020.1794image
ENSG00000215193.11,PEX26PCPGBI.D1870EAG5.6016e-030.2046image
chr22:18095818-18098683:+PCPGAMG.706EER3.5282e-050.4171image
ENSG00000215193.11,PEX26PRADGNF.2EAG1.0059e-14-0.3377image
ENSG00000215193.11,PEX26READLapatinibEAG1.0885e-020.2602image
ENSG00000215193.11,PEX26SARCGDC.0449EAG1.0342e-07-0.3257image
chr22:18095818-18098683:+SARCCGP.082996EER5.5112e-03-0.2986image
ENSG00000215193.11,PEX26SKCMEmbelinEAG2.1321e-080.2547image
chr22:18095818-18098683:+SKCMGDC.0449EER3.2245e-03-0.1898image
chr22:18091334-18094525:+SKCMBI.D1870EER1.3086e-020.1443image
chr22:18088466-18090013:+STADCisplatinEER4.8012e-07-0.2595image
chr22:18091334-18094525:+STADBMS.536924EER1.3525e-04-0.2200image
chr22:18095818-18098683:+STADBMS.536924EER2.3739e-03-0.1660image
ENSG00000215193.11,PEX26STADCisplatinEAG1.5366e-05-0.2236image
chr22:18095818-18098683:+TGCTCisplatinEER1.9857e-02-0.3461image
ENSG00000215193.11,PEX26TGCTGefitinibEAG8.1909e-07-0.3850image
chr22:18095818-18098683:+THCACisplatinEER2.9901e-05-0.2638image
ENSG00000215193.11,PEX26THCAEmbelinEAG1.8702e-170.3664image
chr22:18091334-18094525:+THCAAZ628EER1.0806e-04-0.2246image
ENSG00000215193.11,PEX26THYMEmbelinEAG8.2820e-040.3037image
ENSG00000215193.11,PEX26UCECEmbelinEAG2.9521e-060.3458image
chr22:18091334-18094525:+UCECAZD6244EER5.2689e-04-0.4912image
ENSG00000215193.11,PEX26UCSJW.7.52.1EAG1.0908e-02-0.3377image
ENSG00000215193.11,PEX26UVMGSK269962AEAG8.0913e-04-0.3671image


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check button EAGs targeted by drugs from DrugBank database.
* EAG: EER-associated genes.
EERENSTUniprotIDDrugBankIDDrugDrugType