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Center for Computational Systems Medicine
Soverview

1. Gene summary of enriched editing regions

Soverview

2. Tumor-specific enriched editing regions

Comparison of enriched editing regions between tumor and normal.

Correlation of enriched editing regions with tumor stages.

Associations of enriched editing regions with cancer survival.

Soverview

3. Enriched editing regions and immune related genes

Soverview

4. Enriched editing regions and immune related splicing

Soverview

5. Enriched editing regions and immune infiltration

Soverview

6. Enriched editing regions and immune gene sets

Correlation of enriched editing regions with epithelial-mesenchymal transition.

Correlations of enriched editing regions with hypoxic.

Associations of enriched editing regions with hallmark gene sets from MSigDB.

Soverview

7. Enriched editing regions and drugs

Correlations between enriched editing regions and drug sensitivity.

Enriched editing regions targeted by drugs from DrugBank database.

Editing gene: ARSD (ImmuneEditome ID:414)

1. Gene summary of enriched editing regions for ARSD

check button Gene summary
Gene informationGene symbol

ARSD

Gene ID

414

GeneSynonymsASD
GeneCytomap

Xp22.33

GeneTypeprotein-coding
GeneDescriptionarylsulfatase D|testis tissue sperm-binding protein Li 39a
GeneModificationdate20230329
UniprotIDP51689;H7C327;H0YMY1
PubMed ID

check buttonUCSC image.
all structure

check buttonLocations of each EERs.
EERENSTENSGGeneNameRegionRepeatdsRNA structure
chrX:2906124-2907132:-ENST00000495294.1ENSG00000006756.14ARSDncRNA_exonicAluJb,AluSzchrX:2906124-2907132:-.alignment
chrX:2912015-2914562:-ENST00000217890.9ENSG00000006756.14ARSDncRNA_exonicAluJr,AluJb,MER4B,MER4D1,MSTAchrX:2912015-2914562:-.alignment
chrX:2912015-2914562:-ENST00000481340.1ENSG00000006756.14ARSDncRNA_exonicAluJr,AluJb,MER4B,MER4D1,MSTAchrX:2912015-2914562:-.alignment


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2. Tumor-specific enriched editing regions for ARSD


all structure

check buttonComparison of enriched editing regions between tumor and normal.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
ID_eventscancerTypePBoxplot
chrX:2906124-2907132:-BRCAEER7.7714e-03image
ENSG00000006756.14,ARSDBRCAEAG2.3581e-02image
chrX:2906124-2907132:-COADEER4.5250e-07image
ENSG00000006756.14,ARSDCOADEAG3.2399e-07image
chrX:2906124-2907132:-HNSCEER4.2978e-05image
ENSG00000006756.14,ARSDHNSCEAG5.2646e-05image
chrX:2906124-2907132:-KICHEER1.7628e-02image
ENSG00000006756.14,ARSDKICHEAG1.6967e-02image
chrX:2906124-2907132:-KIRPEER2.1901e-05image
ENSG00000006756.14,ARSDKIRPEAG1.1686e-05image
chrX:2906124-2907132:-LIHCEER7.2270e-03image
ENSG00000006756.14,ARSDLIHCEAG1.3190e-02image
chrX:2906124-2907132:-LUADEER2.3037e-02image
ENSG00000006756.14,ARSDLUADEAG2.9312e-02image
chrX:2906124-2907132:-STADEER1.3703e-02image
ENSG00000006756.14,ARSDSTADEAG4.3774e-03image
chrX:2906124-2907132:-THCAEER1.1565e-06image
ENSG00000006756.14,ARSDTHCAEAG1.4034e-06image
chrX:2906124-2907132:-UCECEER1.1564e-02image
ENSG00000006756.14,ARSDUCECEAG1.7794e-02image


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check buttonCorrelation of enriched editing regions with tumor stages.
* AnovaP<0.05, Pearson P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes, Path: Pathological stage, Cli: Clinical stage.
* Only shows the most significant correlation result of EERs/EAGs with either pathological stage or clinical stage according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeStageTypeAnovaPPRBoxplot
chrX:2906124-2907132:-READPathEER1.1029e-021.9555e-02-0.1886image
ENSG00000006756.14,ARSDREADPathEAG9.3524e-031.8140e-02-0.1908image
chrX:2906124-2907132:-THCAPathEER1.6812e-042.6800e-050.1864image
ENSG00000006756.14,ARSDTHCAPathEAG2.4553e-044.1773e-050.1820image


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check button Associations of enriched editing regions with cancer survival.
* Pkm<0.05 and Pcox<0.05.
* EER: enriched editing region, EAG: EER-associated genes.
ID_eventscancerTypeIDPkmPcox_continuousHR_continuousKMPlot

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3. Enriched editing regions and immune related genes for ARSD


all structure

check button Enriched editing regions and immune related genes.
* First, the associations between enriched editing regions and genes were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the gene relationships with immune were tested by three analyses: whether the gene is an immune gene (InnateDB、Immport、Immunome、Immunogenetic Related Information Source (IRIS)), whether the gene is associated with immune infiltration and whether the gene is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of genes with the fraction of different immune cells and the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeGenebetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark
chrX:2906124-2907132:-COADEERENSG00000220205,VAMP20.20741.6886e-022.2267e-170.4840imageNNNADendritic_cells_activatedGSVA_HALLMARK_MYC_TARGETS_V2
chrX:2906124-2907132:-COADEERENSG00000181222,POLR2A0.20032.1280e-021.0610e-250.5786imageNNNADendritic_cells_activatedGSVA_HALLMARK_APICAL_SURFACE
chrX:2906124-2907132:-GBMEERENSG00000266563,EIF1P50.32343.1630e-031.1200e-070.4022imageNNNAGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALING
chrX:2906124-2907132:-GBMEERENSG00000238150,AC008753.30.31624.1142e-032.0432e-080.4230imageNNNANeutrophilsGSVA_HALLMARK_UV_RESPONSE_DN
chrX:2906124-2907132:-MESOEERENSG00000055332,EIF2AK20.49703.1763e-028.4294e-070.5242imageNNEIF2AK2Macrophages_M0GSVA_HALLMARK_INTERFERON_ALPHA_RESPONSE
chrX:2906124-2907132:-TGCTEERENSG00000137265,IRF40.42961.4309e-042.1690e-060.4287imageNNIRF4Macrophages_M2GSVA_HALLMARK_ALLOGRAFT_REJECTION
chrX:2906124-2907132:-TGCTEERENSG00000150867,PIP4K2A0.39383.9503e-045.9565e-060.4115imageNNNAMacrophages_M2GSVA_HALLMARK_ANGIOGENESIS
chrX:2906124-2907132:-TGCTEERENSG00000211956,IGHV4-340.40305.5681e-048.7721e-100.5369imageNNIGHV4-34Plasma_cellsGSVA_HALLMARK_ANGIOGENESIS
chrX:2906124-2907132:-TGCTEERENSG00000122188,LAX10.38518.6347e-048.7761e-070.4433imageNNLAX1Macrophages_M2GSVA_HALLMARK_ALLOGRAFT_REJECTION
chrX:2906124-2907132:-TGCTEERENSG00000151651,ADAM80.38109.6322e-043.7545e-060.4195imageNNADAM8Macrophages_M2GSVA_HALLMARK_ALLOGRAFT_REJECTION

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4. Enriched editing regions and immune related splicing for ARSD


all structure

check button Enriched editing regions and immune related splicing.
* First, the associations between enriched editing regions and splicing events were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the splicing relationships with immune were tested by three analyses: whether the splicing event locates in an immune gene (InnateDB、Immport, Immunome and Immunogenetic Related Information Source (IRIS)), whether the splicing event is associated with immune infiltration and whether the splicing event is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of splicing events with the fraction of different immune cells and the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeSplicingTypeSplicingGeneSplicingChrSplicingPositionbetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark
chrX:2906124-2907132:-
COADEERMEXENSG00000164687.6chr881280362:81280674:81283365:81283538:81283914:81283974:81284513:812847770.23822.0253e-025.9435e-120.4014imageNNNAT_cells_follicular_helperGSVA_HALLMARK_MITOTIC_SPINDLE
chrX:2906124-2907132:-
COADEERMEXENSG00000108846.11chr1750634921:50634981:50655831:50656008:50665102:50665245:50667553:506675940.26634.2815e-033.1851e-120.4068imageNNNANK_cells_activatedGSVA_HALLMARK_UV_RESPONSE_DN
ENSG00000006756.14,ARSD
LIHCEAGA3ENSG00000116285.8chr18015494:8015633:8014039:8015400:8014039:80153840.17902.4457e-024.7221e-210.5011imageNADAR;BUD13;CNBP;CSTF2T;DDX54;DGCR8;EIF4A3;ELAVL1;EWSR1;FAM120A;FBL;FUS;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;KHDRBS1;LIN28B;MSI1;NOP56;NOP58;PCBP2;PRPF8;RBFOX2;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF9;TAF15;TARDBP;TIA1;U2AF1;U2AF2;UPF1NAMacrophages_M0GSVA_HALLMARK_HEME_METABOLISM
chrX:2906124-2907132:-
PCPGEERA5ENSG00000256269.2chr11119088254:119088308:119084884:119085066:119084884:119085157-0.30738.1637e-031.1175e-08-0.4388imageNNNAT_cells_regulatory_(Tregs)GSVA_HALLMARK_PANCREAS_BETA_CELLS
chrX:2906124-2907132:-
PCPGEERMEXENSG00000144034.10chr273732162:73732285:73734428:73734505:73734527:73734591:73737301:737373350.31242.4450e-024.9872e-080.4088imageNNNAPlasma_cellsGSVA_HALLMARK_MITOTIC_SPINDLE
chrX:2906124-2907132:-
PCPGEERIRENSG00000008853.12chr823004043:23006145:23006727:230077460.27043.2210e-028.7987e-080.4335imageNNNAGSVA_HALLMARK_MITOTIC_SPINDLE
ENSG00000006756.14,ARSD
TGCTEAGIRENSG00000136273.7chr747964319:47964632:47965299:47965438-0.40811.2027e-037.6333e-06-0.4158imageNADAR;BUD13;CNBP;CSTF2T;DDX54;DGCR8;EIF4A3;ELAVL1;EWSR1;FAM120A;FBL;FUS;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;KHDRBS1;LIN28B;MSI1;NOP56;NOP58;PCBP2;PRPF8;RBFOX2;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF9;TAF15;TARDBP;TIA1;U2AF1;U2AF2;UPF1NAB_cells_naiveGSVA_HALLMARK_GLYCOLYSIS
ENSG00000006756.14,ARSD
TGCTEAGESENSG00000138092.6chr224793477:24793501:24793851:24793965:24799674:247997940.28273.2171e-026.1846e-050.4031imageNADAR;BUD13;CNBP;CSTF2T;DDX54;DGCR8;EIF4A3;ELAVL1;EWSR1;FAM120A;FBL;FUS;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;KHDRBS1;LIN28B;MSI1;NOP56;NOP58;PCBP2;PRPF8;RBFOX2;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF9;TAF15;TARDBP;TIA1;U2AF1;U2AF2;UPF1NAMacrophages_M2GSVA_HALLMARK_PANCREAS_BETA_CELLS
chrX:2906124-2907132:-
TGCTEERESENSG00000170632.9chr7103086638:103086764:103086868:103086937:103092476:1030926530.32731.7022e-027.8125e-060.4067imageNNNAB_cells_naiveGSVA_HALLMARK_ESTROGEN_RESPONSE_LATE
chrX:2906124-2907132:-
TGCTEERESENSG00000138092.6chr224793477:24793501:24793851:24793965:24799674:247997940.29062.6794e-023.5898e-050.4147imageNNNAMacrophages_M2GSVA_HALLMARK_PANCREAS_BETA_CELLS

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5. Enriched editing regions and immune infiltration for ARSD


all structure

check button Associations of enriched editing regions with immune infiltration.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the fraction of different immune cells according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeIDImmuneCellPRCorrelationPlot
ENSG00000006756.14,ARSDACCEAGNK_cells_activated4.5266e-020.2789image
chrX:2906124-2907132:-BLCAEERT_cells_CD4_memory_activated2.5169e-040.1887image
ENSG00000006756.14,ARSDBLCAEAGT_cells_CD4_memory_activated3.1703e-040.1857image
chrX:2906124-2907132:-BRCAEERMacrophages_M01.2360e-02-0.0762image
ENSG00000006756.14,ARSDBRCAEAGMacrophages_M01.7732e-03-0.0951image
chrX:2906124-2907132:-CESCEERT_cells_CD4_memory_activated3.3865e-030.1730image
ENSG00000006756.14,ARSDCESCEAGT_cells_CD4_memory_activated2.5368e-030.1779image
chrX:2906124-2907132:-CHOLEERT_cells_CD4_naive1.2357e-120.8931image
ENSG00000006756.14,ARSDCHOLEAGT_cells_CD4_naive3.0651e-120.8865image
chrX:2906124-2907132:-COADEERDendritic_cells_activated3.5249e-040.2151image
chrX:2912015-2914562:-COADEERDendritic_cells_activated2.6502e-030.4739image
ENSG00000006756.14,ARSDCOADEAGDendritic_cells_activated7.9886e-060.2666image
chrX:2906124-2907132:-ESCAEERMast_cells_activated7.5925e-03-0.2117image
chrX:2912015-2914562:-ESCAEERT_cells_follicular_helper1.0564e-02-0.2996image
ENSG00000006756.14,ARSDESCAEAGT_cells_gamma_delta9.8837e-03-0.2047image
chrX:2906124-2907132:-GBMEERT_cells_regulatory_(Tregs)3.0331e-02-0.1702image
ENSG00000006756.14,ARSDGBMEAGT_cells_regulatory_(Tregs)3.1085e-02-0.1695image
chrX:2906124-2907132:-HNSCEERNK_cells_resting6.2042e-030.1287image
ENSG00000006756.14,ARSDHNSCEAGNK_cells_resting5.1403e-030.1316image
chrX:2906124-2907132:-KICHEERT_cells_CD4_memory_activated6.6978e-03-0.3331image
ENSG00000006756.14,ARSDKICHEAGT_cells_CD4_memory_activated7.8023e-03-0.3272image
chrX:2906124-2907132:-KIRCEEREosinophils8.0738e-06-0.2256image
chrX:2912015-2914562:-KIRCEERT_cells_CD4_memory_activated8.0013e-030.3313image
ENSG00000006756.14,ARSDKIRCEAGEosinophils2.8238e-06-0.2364image
chrX:2906124-2907132:-KIRPEERMacrophages_M11.2415e-030.1897image
chrX:2912015-2914562:-KIRPEERT_cells_gamma_delta3.8511e-02-0.2462image
ENSG00000006756.14,ARSDKIRPEAGMacrophages_M11.0318e-030.1927image
chrX:2906124-2907132:-LAMLEERNK_cells_resting1.4008e-020.2044image
chrX:2912015-2914562:-LAMLEERT_cells_follicular_helper4.4617e-020.2882image
ENSG00000006756.14,ARSDLAMLEAGT_cells_CD4_memory_activated2.5615e-020.1860image
chrX:2906124-2907132:-LGGEERPlasma_cells1.6754e-030.1798image
ENSG00000006756.14,ARSDLGGEAGPlasma_cells1.5690e-030.1809image
chrX:2906124-2907132:-LIHCEERT_cells_CD4_memory_activated2.7591e-02-0.1195image
ENSG00000006756.14,ARSDLIHCEAGT_cells_CD4_memory_activated1.4799e-02-0.1315image
chrX:2906124-2907132:-LUADEERT_cells_CD81.1136e-060.2137image
ENSG00000006756.14,ARSDLUADEAGT_cells_CD81.6105e-060.2106image
chrX:2906124-2907132:-LUSCEERMacrophages_M21.1054e-040.1756image
chrX:2912015-2914562:-LUSCEERT_cells_CD4_memory_resting2.4911e-020.4307image
ENSG00000006756.14,ARSDLUSCEAGMacrophages_M28.3772e-050.1785image
chrX:2906124-2907132:-MESOEERT_cells_CD84.2711e-020.2301image
ENSG00000006756.14,ARSDMESOEAGT_cells_CD84.2709e-020.2301image
chrX:2906124-2907132:-OVEERMacrophages_M23.2906e-020.1251image
chrX:2912015-2914562:-OVEEREosinophils4.7852e-030.2828image
ENSG00000006756.14,ARSDOVEAGMacrophages_M21.2729e-020.1459image
chrX:2906124-2907132:-PCPGEERT_cells_gamma_delta7.2130e-040.2606image
chrX:2912015-2914562:-PCPGEEREosinophils3.4651e-020.4521image
ENSG00000006756.14,ARSDPCPGEAGT_cells_gamma_delta3.3283e-040.2752image
chrX:2906124-2907132:-PRADEERDendritic_cells_activated5.6244e-030.1240image
chrX:2912015-2914562:-PRADEERT_cells_follicular_helper4.3172e-03-0.3726image
ENSG00000006756.14,ARSDPRADEAGDendritic_cells_activated3.2560e-030.1317image
chrX:2906124-2907132:-READEERPlasma_cells3.1962e-020.2203image
ENSG00000006756.14,ARSDREADEAGPlasma_cells3.1520e-020.2208image
chrX:2906124-2907132:-SARCEERMast_cells_resting1.6547e-020.1614image
ENSG00000006756.14,ARSDSARCEAGMast_cells_resting1.3569e-020.1658image
chrX:2906124-2907132:-SKCMEERT_cells_CD88.8680e-060.2068image
ENSG00000006756.14,ARSDSKCMEAGT_cells_CD86.8714e-060.2093image
chrX:2906124-2907132:-STADEEREosinophils8.6988e-04-0.1724image
chrX:2912015-2914562:-STADEERB_cells_naive1.7355e-030.2229image
ENSG00000006756.14,ARSDSTADEAGEosinophils1.0897e-03-0.1692image
chrX:2906124-2907132:-TGCTEERMacrophages_M21.1686e-03-0.3016image
ENSG00000006756.14,ARSDTGCTEAGMacrophages_M21.8009e-03-0.2905image
chrX:2906124-2907132:-THCAEERT_cells_regulatory_(Tregs)2.6877e-050.1862image
chrX:2912015-2914562:-THCAEERT_cells_CD4_memory_resting1.8927e-020.3128image
ENSG00000006756.14,ARSDTHCAEAGT_cells_regulatory_(Tregs)6.5461e-050.1772image
chrX:2906124-2907132:-THYMEERT_cells_CD4_memory_activated2.2888e-030.3265image
ENSG00000006756.14,ARSDTHYMEAGDendritic_cells_resting2.5352e-03-0.3216image


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6. Enriched editing regions and immune gene sets for ARSD


all structure

check button Correlation of enriched editing regions with epithelial-mesenchymal transition.
* First, the differences of enriched editing regions between Epi and Mes groups (defined by KS-test) were compared (P<0.05 and Informative number >=20).
* Second, the correlations between enriched editing regions and gene set score of HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the EERs/EAGs significantly edited between Epi and Mes group.
ID_eventscancerTypeE2M_PBoxplotCorPCorRCorrelationPlot
chrX:2906124-2907132:-BLCAEER7.0694e-04image2.2048e-020.1187image
ENSG00000006756.14,ARSDBLCAEAG5.5042e-04image2.0657e-020.1200image


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check button Correlations of enriched editing regions with hypoxic.
* First, there are four hypoxia scores used in the database. The first three hypoxic scores were calculated on three gene sets of Buffa, Ragnum and Winter based on one previous study (PMID: 32024819). One last hypoxia score was defined on HALLMARK_HYPOXIA by GSVA method.
* Second, the correlations enriched editing regions with the four hypoxic scores were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the EERs/EAGs significantly correlated with all four hypoxia gene set scores. For more results, please go to download page.
ID_eventscancerTypeBuffa_P Buffa_R Ragnum_P Ragnum_R Winter_P Winter_R HALLMARK_P HALLMARK_R CorrelationPlot
chrX:2906124-2907132:-LUADEER2.3662e-050.18601.6328e-040.16621.7743e-050.18882.6598e-060.2062image
ENSG00000006756.14,ARSDLUADEAG2.9685e-050.18382.2965e-040.16242.1928e-050.18671.9732e-060.2088image


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check button Associations of enriched editing regions with hallmark gene sets from MSigDB.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerHallmarkTypeTypePRCorrelationPlot
chrX:2906124-2907132:-ACCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER1.9869e-020.3221image
ENSG00000006756.14,ARSDACCGSVA_HALLMARK_PANCREAS_BETA_CELLSEAG2.6566e-02-0.3075image
chrX:2906124-2907132:-BLCAGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEER1.3926e-050.2232image
ENSG00000006756.14,ARSDBLCAGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEAG1.0031e-050.2268image
chrX:2912015-2914562:-BRCAGSVA_HALLMARK_UV_RESPONSE_DNEER1.0155e-040.2179image
ENSG00000006756.14,ARSDBRCAGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEAG6.8702e-170.2505image
chrX:2906124-2907132:-BRCAGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER2.9414e-160.2457image
ENSG00000006756.14,ARSDCESCGSVA_HALLMARK_PI3K_AKT_MTOR_SIGNALINGEAG1.1437e-040.2262image
chrX:2906124-2907132:-CESCGSVA_HALLMARK_PI3K_AKT_MTOR_SIGNALINGEER2.1665e-040.2174image
chrX:2906124-2907132:-COADGSVA_HALLMARK_PEROXISOMEEER3.7820e-03-0.1750image
ENSG00000006756.14,ARSDCOADGSVA_HALLMARK_PEROXISOMEEAG2.9816e-04-0.2173image
ENSG00000006756.14,ARSDESCAGSVA_HALLMARK_MITOTIC_SPINDLEEAG7.6745e-040.2650image
chrX:2906124-2907132:-ESCAGSVA_HALLMARK_MITOTIC_SPINDLEEER9.3995e-040.2607image
chrX:2912015-2914562:-ESCAGSVA_HALLMARK_DNA_REPAIREER8.2152e-04-0.3856image
ENSG00000006756.14,ARSDGBMGSVA_HALLMARK_UV_RESPONSE_DNEAG2.5756e-03-0.2353image
chrX:2906124-2907132:-GBMGSVA_HALLMARK_UV_RESPONSE_DNEER2.5765e-03-0.2353image
ENSG00000006756.14,ARSDHNSCGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEAG3.8450e-040.1665image
chrX:2906124-2907132:-HNSCGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEER5.4895e-040.1621image
ENSG00000006756.14,ARSDKICHGSVA_HALLMARK_HEME_METABOLISMEAG4.7508e-040.4212image
chrX:2906124-2907132:-KICHGSVA_HALLMARK_HEME_METABOLISMEER4.5628e-040.4224image
ENSG00000006756.14,ARSDKIRCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEAG9.7697e-100.3055image
chrX:2906124-2907132:-KIRCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER3.4307e-080.2770image
chrX:2912015-2914562:-KIRCGSVA_HALLMARK_XENOBIOTIC_METABOLISMEER3.0578e-03-0.3674image
chrX:2912015-2914562:-KIRPGSVA_HALLMARK_MYC_TARGETS_V2EER1.0270e-02-0.3028image
ENSG00000006756.14,ARSDKIRPGSVA_HALLMARK_KRAS_SIGNALING_DNEAG1.9241e-030.1824image
chrX:2906124-2907132:-KIRPGSVA_HALLMARK_KRAS_SIGNALING_DNEER1.2746e-030.1893image
chrX:2912015-2914562:-LAMLGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALINGEER9.7466e-03-0.3658image
ENSG00000006756.14,ARSDLAMLGSVA_HALLMARK_IL2_STAT5_SIGNALINGEAG3.1669e-030.2443image
chrX:2906124-2907132:-LAMLGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALINGEER1.3150e-030.2652image
ENSG00000006756.14,ARSDLGGGSVA_HALLMARK_HEDGEHOG_SIGNALINGEAG7.4934e-030.1533image
chrX:2906124-2907132:-LGGGSVA_HALLMARK_HEDGEHOG_SIGNALINGEER7.5720e-030.1532image
ENSG00000006756.14,ARSDLIHCGSVA_HALLMARK_CHOLESTEROL_HOMEOSTASISEAG1.3815e-020.1328image
chrX:2906124-2907132:-LIHCGSVA_HALLMARK_PANCREAS_BETA_CELLSEER1.3403e-030.1733image
chrX:2912015-2914562:-LUADGSVA_HALLMARK_IL6_JAK_STAT3_SIGNALINGEER1.5093e-030.2977image
ENSG00000006756.14,ARSDLUADGSVA_HALLMARK_PI3K_AKT_MTOR_SIGNALINGEAG1.5077e-110.2929image
chrX:2906124-2907132:-LUADGSVA_HALLMARK_PI3K_AKT_MTOR_SIGNALINGEER1.9104e-110.2915image
chrX:2912015-2914562:-LUSCGSVA_HALLMARK_UV_RESPONSE_DNEER3.8188e-030.5377image
chrX:2906124-2907132:-LUSCGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEER1.7411e-050.1947image
ENSG00000006756.14,ARSDLUSCGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEAG9.1195e-060.2010image
chrX:2906124-2907132:-MESOGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEER5.2224e-030.3133image
ENSG00000006756.14,ARSDMESOGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEAG5.2304e-030.3132image
ENSG00000006756.14,ARSDOVGSVA_HALLMARK_HEME_METABOLISMEAG5.3810e-060.2631image
chrX:2906124-2907132:-OVGSVA_HALLMARK_HEME_METABOLISMEER9.0845e-060.2569image
chrX:2912015-2914562:-OVGSVA_HALLMARK_ESTROGEN_RESPONSE_LATEEER6.7245e-03-0.2721image
chrX:2912015-2914562:-PAADGSVA_HALLMARK_DNA_REPAIREER3.1695e-02-0.4697image
ENSG00000006756.14,ARSDPAADGSVA_HALLMARK_MTORC1_SIGNALINGEAG4.1011e-020.1533image
chrX:2906124-2907132:-PAADGSVA_HALLMARK_MTORC1_SIGNALINGEER4.2467e-020.1523image
chrX:2906124-2907132:-PCPGGSVA_HALLMARK_UV_RESPONSE_DNEER1.4083e-02-0.1908image
chrX:2912015-2914562:-PRADGSVA_HALLMARK_MYOGENESISEER1.1568e-020.3322image
ENSG00000006756.14,ARSDPRADGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEAG1.3464e-05-0.1939image
chrX:2906124-2907132:-PRADGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEER1.8008e-05-0.1911image
chrX:2906124-2907132:-READGSVA_HALLMARK_IL6_JAK_STAT3_SIGNALINGEER4.5776e-020.2055image
ENSG00000006756.14,ARSDREADGSVA_HALLMARK_IL6_JAK_STAT3_SIGNALINGEAG4.2107e-020.2090image
ENSG00000006756.14,ARSDSARCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEAG2.0435e-020.1559image
chrX:2906124-2907132:-SARCGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER2.1291e-020.1552image
chrX:2906124-2907132:-SKCMGSVA_HALLMARK_GLYCOLYSISEER1.0804e-04-0.1807image
ENSG00000006756.14,ARSDSKCMGSVA_HALLMARK_GLYCOLYSISEAG5.8866e-05-0.1874image
chrX:2906124-2907132:-STADGSVA_HALLMARK_MITOTIC_SPINDLEEER1.2373e-090.3091image
chrX:2912015-2914562:-STADGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEER1.5200e-04-0.2680image
ENSG00000006756.14,ARSDSTADGSVA_HALLMARK_MITOTIC_SPINDLEEAG3.5739e-100.3186image
ENSG00000006756.14,ARSDTGCTGSVA_HALLMARK_ALLOGRAFT_REJECTIONEAG6.2731e-040.3169image
chrX:2906124-2907132:-TGCTGSVA_HALLMARK_ALLOGRAFT_REJECTIONEER9.4687e-040.3069image
chrX:2906124-2907132:-THCAGSVA_HALLMARK_ESTROGEN_RESPONSE_EARLYEER3.3546e-120.3041image
ENSG00000006756.14,ARSDTHCAGSVA_HALLMARK_ESTROGEN_RESPONSE_EARLYEAG3.1370e-120.3045image
chrX:2912015-2914562:-THCAGSVA_HALLMARK_UV_RESPONSE_DNEER6.0620e-030.3624image
chrX:2906124-2907132:-THYMGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER1.5174e-030.3388image
ENSG00000006756.14,ARSDTHYMGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEAG1.4829e-030.3375image
chrX:2912015-2914562:-UCECGSVA_HALLMARK_MYOGENESISEER5.6376e-040.6299image
chrX:2906124-2907132:-UCECGSVA_HALLMARK_NOTCH_SIGNALINGEER5.8371e-03-0.2118image
ENSG00000006756.14,ARSDUCECGSVA_HALLMARK_MYC_TARGETS_V1EAG2.3778e-03-0.2316image
chrX:2906124-2907132:-UVMGSVA_HALLMARK_CHOLESTEROL_HOMEOSTASISEER7.3877e-030.2974image
ENSG00000006756.14,ARSDUVMGSVA_HALLMARK_CHOLESTEROL_HOMEOSTASISEAG1.1245e-020.2821image


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7. Enriched editing regions and drugs for ARSD


all structure

check button Correlations between enriched editing regions and drug sensitivity.
* First, the drug sensitivity (IS50) was estimated on 84 drugs by pRRophetic package.
* Second, the correlations between editing enriched regions and drug sensitivity were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the IS50 scores of 84 drugs according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerDrugTypePRCorrelationPlot
chrX:2906124-2907132:-ACCGDC0941EER2.8515e-020.3039image
ENSG00000006756.14,ARSDACCBI.2536EAG2.4139e-020.3124image
chrX:2906124-2907132:-BLCAKU.55933EER5.2028e-06-0.2338image
ENSG00000006756.14,ARSDBLCAKU.55933EAG5.8517e-06-0.2325image
ENSG00000006756.14,ARSDBRCACCT007093EAG2.4824e-10-0.1912image
chrX:2906124-2907132:-BRCACCT007093EER1.8990e-08-0.1703image
chrX:2912015-2914562:-BRCAFH535EER2.1116e-02-0.1303image
chrX:2906124-2907132:-CESCCGP.082996EER1.5567e-03-0.1866image
ENSG00000006756.14,ARSDCESCCGP.082996EAG7.9912e-03-0.1566image
chrX:2906124-2907132:-CHOLAG.014699EER4.2702e-040.5705image
ENSG00000006756.14,ARSDCHOLAG.014699EAG3.6876e-040.5756image
chrX:2912015-2914562:-COADBMS.708163EER3.5864e-03-0.4609image
ENSG00000006756.14,ARSDCOADLFM.A13EAG2.2427e-03-0.1842image
chrX:2906124-2907132:-COADLFM.A13EER3.4094e-03-0.1770image
chrX:2912015-2914562:-ESCALFM.A13EER2.8581e-03-0.3466image
chrX:2906124-2907132:-ESCACisplatinEER7.2806e-030.2128image
ENSG00000006756.14,ARSDESCABortezomibEAG9.0409e-030.2071image
ENSG00000006756.14,ARSDGBMEmbelinEAG6.9437e-040.2638image
chrX:2906124-2907132:-GBMEmbelinEER6.9005e-040.2639image
ENSG00000006756.14,ARSDHNSCCyclopamineEAG6.4523e-03-0.1282image
chrX:2906124-2907132:-HNSCCyclopamineEER7.1628e-03-0.1266image
chrX:2906124-2907132:-KICHAKT.inhibitor.VIIIEER4.8590e-04-0.4206image
ENSG00000006756.14,ARSDKICHAKT.inhibitor.VIIIEAG6.8085e-04-0.4106image
ENSG00000006756.14,ARSDKIRCBAY.61.3606EAG5.4288e-14-0.3712image
chrX:2906124-2907132:-KIRCEmbelinEER7.5910e-07-0.2492image
chrX:2912015-2914562:-KIRCBIRB.0796EER1.1209e-03-0.4012image
ENSG00000006756.14,ARSDKIRPDMOGEAG8.3017e-05-0.2302image
chrX:2912015-2914562:-KIRPBryostatin.1EER5.1598e-040.4017image
chrX:2906124-2907132:-KIRPDMOGEER4.0316e-04-0.2075image
ENSG00000006756.14,ARSDLAMLJW.7.52.1EAG3.4567e-03-0.2421image
chrX:2912015-2914562:-LAMLBX.795EER8.2403e-04-0.4624image
chrX:2906124-2907132:-LAMLJW.7.52.1EER1.7503e-03-0.2586image
chrX:2906124-2907132:-LGGA.443654EER4.4466e-040.2005image
ENSG00000006756.14,ARSDLGGA.443654EAG4.8629e-040.1992image
ENSG00000006756.14,ARSDLIHCCGP.60474EAG4.6124e-05-0.2181image
chrX:2906124-2907132:-LIHCBAY.61.3606EER1.5256e-040.2040image
ENSG00000006756.14,ARSDLUADGNF.2EAG1.0247e-04-0.1712image
chrX:2912015-2914562:-LUADCI.1040EER1.1882e-02-0.2380image
chrX:2906124-2907132:-LUADGNF.2EER1.1073e-04-0.1704image
chrX:2912015-2914562:-LUSCAZD6482EER6.4532e-03-0.5110image
ENSG00000006756.14,ARSDLUSCBryostatin.1EAG3.0446e-050.1891image
chrX:2906124-2907132:-LUSCBryostatin.1EER3.5354e-050.1876image
chrX:2906124-2907132:-MESOGNF.2EER1.8190e-030.3476image
ENSG00000006756.14,ARSDMESOGNF.2EAG1.8162e-030.3477image
chrX:2906124-2907132:-OVKIN001.135EER2.6851e-04-0.2121image
ENSG00000006756.14,ARSDOVCytarabineEAG5.1476e-040.2024image
chrX:2912015-2914562:-OVLenalidomideEER5.8497e-04-0.3412image
chrX:2912015-2914562:-PAADGNF.2EER3.2613e-05-0.7783image
chrX:2906124-2907132:-PAADBleomycinEER7.8136e-030.1988image
ENSG00000006756.14,ARSDPAADBleomycinEAG6.0176e-030.2051image
chrX:2906124-2907132:-PCPGElesclomolEER2.5870e-03-0.2331image
ENSG00000006756.14,ARSDPCPGElesclomolEAG1.6590e-02-0.1857image
ENSG00000006756.14,ARSDPRADJNK.Inhibitor.VIIIEAG3.2818e-09-0.2614image
chrX:2906124-2907132:-PRADJNK.Inhibitor.VIIIEER7.6404e-08-0.2382image
chrX:2912015-2914562:-PRADMetforminEER4.0968e-030.3746image
chrX:2906124-2907132:-READAMG.706EER6.2534e-040.3464image
ENSG00000006756.14,ARSDREADAMG.706EAG6.6447e-040.3449image
ENSG00000006756.14,ARSDSARCAKT.inhibitor.VIIIEAG1.3264e-03-0.2146image
chrX:2906124-2907132:-SARCAKT.inhibitor.VIIIEER1.5839e-03-0.2118image
ENSG00000006756.14,ARSDSKCMLenalidomideEAG1.1011e-06-0.2263image
chrX:2906124-2907132:-SKCMLenalidomideEER3.0678e-06-0.2170image
chrX:2906124-2907132:-STADBAY.61.3606EER6.8349e-05-0.2055image
ENSG00000006756.14,ARSDSTADBAY.61.3606EAG3.8144e-05-0.2124image
chrX:2912015-2914562:-STADAP.24534EER2.5612e-03-0.2148image
ENSG00000006756.14,ARSDTGCTBosutinibEAG4.0260e-06-0.4183image
chrX:2906124-2907132:-TGCTBosutinibEER3.4478e-06-0.4209image
chrX:2906124-2907132:-THCACytarabineEER3.1129e-120.3045image
ENSG00000006756.14,ARSDTHCACytarabineEAG1.8659e-120.3075image
chrX:2912015-2914562:-THCABMS.708163EER2.3071e-02-0.3033image
chrX:2906124-2907132:-THYMAZD6244EER2.5677e-04-0.3867image
ENSG00000006756.14,ARSDTHYMGSK.650394EAG1.3212e-020.2663image
ENSG00000006756.14,ARSDUCECLenalidomideEAG1.1795e-04-0.2910image
chrX:2912015-2914562:-UCECBMS.754807EER3.2221e-06-0.7758image
chrX:2906124-2907132:-UCECJNK.9LEER9.4232e-050.2967image
chrX:2906124-2907132:-UCSAZD7762EER1.7156e-02-0.3357image
ENSG00000006756.14,ARSDUCSAZD7762EAG1.4479e-02-0.3439image
chrX:2906124-2907132:-UVMKIN001.135EER3.7777e-04-0.3879image
ENSG00000006756.14,ARSDUVMAICAREAG6.9225e-04-0.3715image


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check button EAGs targeted by drugs from DrugBank database.
* EAG: EER-associated genes.
EERENSTUniprotIDDrugBankIDDrugDrugType