CAeditome Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
Soverview

1. Gene summary of enriched editing regions

Soverview

2. Tumor-specific enriched editing regions

Comparison of enriched editing regions between tumor and normal.

Correlation of enriched editing regions with tumor stages.

Associations of enriched editing regions with cancer survival.

Soverview

3. Enriched editing regions and immune related genes

Soverview

4. Enriched editing regions and immune related splicing

Soverview

5. Enriched editing regions and immune infiltration

Soverview

6. Enriched editing regions and immune gene sets

Correlation of enriched editing regions with epithelial-mesenchymal transition.

Correlations of enriched editing regions with hypoxic.

Associations of enriched editing regions with hallmark gene sets from MSigDB.

Soverview

7. Enriched editing regions and drugs

Correlations between enriched editing regions and drug sensitivity.

Enriched editing regions targeted by drugs from DrugBank database.

Editing gene: UQCR11 (ImmuneEditome ID:10975)

1. Gene summary of enriched editing regions for UQCR11

check button Gene summary
Gene informationGene symbol

UQCR11

Gene ID

10975

GeneSynonyms0710008D09Rik|QCR10|UQCR
GeneCytomap

19p13.3

GeneTypeprotein-coding
GeneDescriptioncytochrome b-c1 complex subunit 10|complex III subunit 10|complex III subunit XI|ubiquinol-cytochrome c reductase complex 6.4 kDa protein|ubiquinol-cytochrome c reductase, 6.4kDa subunit
GeneModificationdate20230329
UniprotIDO14957
PubMed ID

check buttonUCSC image.
all structure

check buttonLocations of each EERs.
EERENSTENSGGeneNameRegionRepeatdsRNA structure
chr19:1586549-1590644:-ENST00000585937.1ENSG00000267059.2UQCR11intronicAluSx1,AluSq,L1MB7,AluSx3,AluYh3,AluJb,AluJr4,AluJr,L1MB8,AluSq2chr19:1586549-1590644:-.alignment
chr19:1594674-1597357:-ENST00000591899.6ENSG00000127540.10UQCR11UTR3FLAM_C,AluJo,Alu,AluSx,AluJr,MLT1F,L1MC4a,L1MB5,AluSc8,AluSq,AluSp,AluSx1,MLT1Bchr19:1594674-1597357:-.alignment


Top

2. Tumor-specific enriched editing regions for UQCR11


all structure

check buttonComparison of enriched editing regions between tumor and normal.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
ID_eventscancerTypePBoxplot
chr19:1586549-1590644:-BRCAEER4.3176e-02image
ENSG00000267059.2,UQCR11BRCAEAG2.0123e-02image


Top

check buttonCorrelation of enriched editing regions with tumor stages.
* AnovaP<0.05, Pearson P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes, Path: Pathological stage, Cli: Clinical stage.
* Only shows the most significant correlation result of EERs/EAGs with either pathological stage or clinical stage according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeStageTypeAnovaPPRBoxplot
chr19:1586549-1590644:-CESCCliEER1.9707e-021.8205e-03-0.2751image
chr19:1586549-1590644:-KIRCPathEER1.2428e-031.2031e-030.2141image
ENSG00000267059.2,UQCR11KIRCPathEAG1.2257e-039.8447e-030.1589image
ENSG00000267059.2,UQCR11LUSCPathEAG2.5458e-035.9144e-040.1934image
chr19:1586549-1590644:-LUSCPathEER3.5153e-028.8480e-030.1554image


Top

check button Associations of enriched editing regions with cancer survival.
* Pkm<0.05 and Pcox<0.05.
* EER: enriched editing region, EAG: EER-associated genes.
ID_eventscancerTypeIDPkmPcox_continuousHR_continuousKMPlot
ENSG00000127540.10,UQCR11BLCAEAG8.5268e-031.8302e-028.5278e+06image
ENSG00000127540.10,UQCR11BRCAEAG4.4155e-041.6223e-021.7114e+11image
chr19:1586549-1590644:-KIRCEER2.3933e-023.5136e-032.4448e+02image

Top

3. Enriched editing regions and immune related genes for UQCR11


all structure

check button Enriched editing regions and immune related genes.
* First, the associations between enriched editing regions and genes were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the gene relationships with immune were tested by three analyses: whether the gene is an immune gene (InnateDB、Immport、Immunome、Immunogenetic Related Information Source (IRIS)), whether the gene is associated with immune infiltration and whether the gene is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of genes with the fraction of different immune cells and the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeGenebetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark
chr19:1586549-1590644:-ESCAEERENSG00000256745,RP11-680H20.10.38796.7066e-043.9400e-080.4212imageNNNAGSVA_HALLMARK_MITOTIC_SPINDLE
chr19:1586549-1590644:-ESCAEERENSG00000132963,POMP0.34783.7343e-036.7667e-090.4421imageNAUH;CNBP;CSTF2T;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;ELAVL1;FAM120A;FBL;FMR1;FTO;HNRNPA1;HNRNPC;HNRNPK;IGF2BP1;IGF2BP2;IGF2BP3;KHDRBS1;KHDRBS2;KHDRBS3;LARP7;LIN28;LIN28A;LIN28B;MOV10;MSI1;NOP56;NOP58;PTBP1;QKI;RBFOX2;RBM10;RBM22;RNF219;SLBP;SMNDC1;SND1;SRSF1;TAF15;TARDBP;TROVE2;U2AF2;UPF1;ZC3H7B;AIFM1;DDX3X;ELAVL3;FUS;FXR1;GNL3;GTF2F1;HNRNPL;NONO;NPM1;NUMA1;PCBP2;RBM27;SLTM;TIA1;TNRC6A;U2AF1POMPMacrophages_M1GSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATION
chr19:1586549-1590644:-ESCAEERENSG00000135211,TMEM600.30711.5911e-021.1424e-070.4079imageNCNBP;CSTF2T;DDX42;DDX54;DGCR8;DHX9;DKC1;EIF4A3;ELAVL1;FBL;FMR1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS2;LIN28;LIN28A;LIN28B;MOV10;NOP58;PTBP1;RBFOX2;SMNDC1;SND1;SRSF1;TAF15;TROVE2;U2AF2;UPF1;DDX3X;ELAVL3;FUS;FXR1;GNL3;GTF2F1;NUMA1;PCBP2;TIA1;TNRC6A;U2AF1;YTHDF1NAT_cells_gamma_deltaGSVA_HALLMARK_DNA_REPAIR
chr19:1586549-1590644:-ESCAEERENSG00000101608,MYL12A0.29722.1065e-022.1917e-120.5227imageNAUH;CNBP;CSTF2T;DDX42;DDX54;DGCR8;DICER1;EIF4A3;ELAVL1;FAM120A;FBL;FMR1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHDRBS3;LARP7;LIN28;LIN28A;LIN28B;MOV10;MSI1;NOP56;NOP58;PTBP1;QKI;RBFOX2;RBM22;RNF219;SBDS;SLBP;SMNDC1;SND1;SRSF1;TAF15;TARDBP;TROVE2;U2AF2;UPF1;ZC3H7B;AIFM1;DDX3X;FUS;FXR1;GNL3;GTF2F1;HNRNPL;NONO;NPM1;NUMA1;PCBP2;RBM27;SLTM;TIA1;TNRC6A;U2AF1;YTHDF1NAT_cells_CD8GSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
chr19:1586549-1590644:-ESCAEERENSG00000241511,RPS15AP240.29372.3503e-026.3556e-090.4428imageNNNAT_cells_CD8GSVA_HALLMARK_PROTEIN_SECRETION

More results



Top

4. Enriched editing regions and immune related splicing for UQCR11


all structure

check button Enriched editing regions and immune related splicing.
* First, the associations between enriched editing regions and splicing events were tested by QTL and Pearson method (QTL: FDR<0.05 and Pearson: P<0.05).
* Second, the splicing relationships with immune were tested by three analyses: whether the splicing event locates in an immune gene (InnateDB、Immport, Immunome and Immunogenetic Related Information Source (IRIS)), whether the splicing event is associated with immune infiltration and whether the splicing event is related to immune gene sets.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of splicing events with the fraction of different immune cells and the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeSplicingTypeSplicingGeneSplicingChrSplicingPositionbetaFDRPearsonPPearsonRCorrelationPlotRBPRBPtargetsImmuneGeneImmuneFractionHallMark
ENSG00000267059.2,UQCR11
ESCAEAGIRENSG00000185252.13chr2220394114:20394662:20395332:20395418-0.33673.3085e-033.0016e-06-0.4233imageNADAR;AIFM1;BCCIP;BUD13;CAPRIN1;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DICER1;DKC1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHSRP;LARP7;LIN28;LIN28A;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RNF219;RTCB;SAFB2;SBDS;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDF1;YWHAG;ZNF184NAT_cells_CD4_memory_restingGSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
chr19:1586549-1590644:-
ESCAEERIRENSG00000185252.13chr2220394114:20394662:20395332:20395418-0.35231.2344e-031.4728e-06-0.4350imageNCNBP;CSTF2T;DDX42;DDX54;DGCR8;DICER1;DKC1;EIF4A3;ELAVL1;FAM120A;FBL;FMR1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS3;LARP7;LIN28;LIN28A;LIN28B;MOV10;MSI1;NOP56;NOP58;PTBP1;RBFOX2;RBM10;RBM22;RNF219;SBDS;SLBP;SMNDC1;SND1;SRSF1;TAF15;TARDBP;TROVE2;U2AF2;UPF1;AIFM1;DDX3X;FUS;FXR1;GNL3;GTF2F1;HNRNPL;NONO;NUMA1;PCBP2;RBM27;SLTM;TIA1;TNRC6A;U2AF1;YTHDF1NAT_cells_CD4_memory_restingGSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
chr19:1586549-1590644:-
ESCAEERIRENSG00000205531.8chr112952837:2954410:2954526:2954646-0.27752.5764e-022.1839e-06-0.4152imageNAUH;CBX7;CNBP;CSTF2T;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;ELAVL1;FAM120A;FBL;FMR1;FTO;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHDRBS3;LARP7;LIN28;LIN28A;LIN28B;MOV10;MSI1;NOP56;NOP58;PTBP1;QKI;RBFOX2;RBM10;RBM22;RNF219;SBDS;SLBP;SMNDC1;SND1;SRSF1;TAF15;TARBP2;TARDBP;TROVE2;U2AF2;UPF1;ZC3H7B;AIFM1;DDX3X;ELAVL3;FUS;FXR1;GNL3;GTF2F1;HNRNPL;NONO;NPM1;NUMA1;PCBP2;RBM27;SLTM;TIA1;TNRC6A;U2AF1;YTHDF1NAT_cells_CD4_naiveGSVA_HALLMARK_HYPOXIA
ENSG00000267059.2,UQCR11
ESCAEAGIRENSG00000149532.11chr1161419921:61420573:61421191:61421257-0.29921.9995e-025.0888e-06-0.4076imageNADAR;AIFM1;AUH;BCCIP;BUD13;CAPRIN1;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;EIF4G1;EIF4G2;ELAVL1;FAM120A;FBL;FKBP4;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LARP7;LIN28;LIN28A;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NPM1;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RBM5;RNF219;RTCB;SAFB2;SBDS;SF3A3;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TIAL1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;VIM;XRN2;YTHDC1;YTHDF1;YWHAG;ZC3H7B;ZNF184NAT_cells_CD4_memory_restingGSVA_HALLMARK_HYPOXIA
chr19:1586549-1590644:-
ESCAEERIRENSG00000149532.11chr1161419921:61420573:61421191:61421257-0.30601.2516e-022.6817e-06-0.4184imageNAUH;CBX7;CNBP;CSTF2T;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;ELAVL1;FAM120A;FBL;FMR1;FTO;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHDRBS3;LARP7;LIN28;LIN28A;LIN28B;MOV10;MSI1;NOP56;NOP58;PTBP1;QKI;RBFOX2;RBM10;RBM22;RNF219;SBDS;SLBP;SMNDC1;SND1;SRSF1;TAF15;TARBP2;TARDBP;TROVE2;U2AF2;UPF1;ZC3H7B;AIFM1;DDX3X;ELAVL3;FUS;FXR1;GNL3;GTF2F1;HNRNPL;NONO;NPM1;NUMA1;PCBP2;RBM27;SLTM;TIA1;TNRC6A;U2AF1;YTHDF1NAT_cells_CD4_memory_restingGSVA_HALLMARK_HYPOXIA
ENSG00000267059.2,UQCR11
GBMEAGIRENSG00000184436.7chr2221000646:21000787:21001255:21001411-0.41185.8179e-034.6285e-07-0.4393imageNAIFM1;AUH;BCCIP;BUD13;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;EIF4A3;EIF4G1;EIF4G2;ELAVL1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPK;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHSRP;LARP4B;LARP7;LIN28;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RNF219;SAFB2;SBDS;SF3A3;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;VIM;XRN2;YTHDC1;YTHDF1;YWHAG;ZNF184NAMonocytesGSVA_HALLMARK_WNT_BETA_CATENIN_SIGNALING
ENSG00000267059.2,UQCR11
GBMEAGIRENSG00000267216.1chr1958306034:58306216:58312196:58312462-0.39406.0214e-036.6195e-06-0.4031imageNADAR;AIFM1;AUH;BCCIP;BUD13;CAPRIN1;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FKBP4;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LARP7;LIN28;LIN28A;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RNF219;SAFB2;SBDS;SF3A3;SF3B4;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TIAL1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;VIM;XRN2;YTHDC1;YTHDF1;YWHAG;ZC3H7B;ZNF184NAT_cells_gamma_deltaGSVA_HALLMARK_ADIPOGENESIS
ENSG00000267059.2,UQCR11
GBMEAGIRENSG00000179029.10chr178173236:8174272:8174519:8174616-0.37301.8625e-025.2044e-06-0.4024imageNADAR;AIFM1;AUH;BCCIP;BUD13;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FKBP4;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LARP7;LIN28;LIN28A;LIN28B;LSM11;METTL14;MOV10;MSI2;NONO;NOP56;NOP58;NPM1;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RBM5;RNF219;SAFB2;SBDS;SF3A3;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TIAL1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;VIM;XRN2;YTHDC1;YTHDF1;YWHAG;ZC3H7B;ZNF184NAMonocytesGSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
ENSG00000267059.2,UQCR11
GBMEAGIRENSG00000067369.9chr1543407208:43407570:43407942:43408088-0.42543.8394e-031.3761e-06-0.4226imageNADAR;AIFM1;AUH;BCCIP;BUD13;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LIN28;LIN28A;LIN28B;LSM11;METTL14;MOV10;MSI2;NONO;NOP56;NOP58;NPM1;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RBM5;RNF219;SAFB2;SF3A3;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TIAL1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;VIM;XRN2;YTHDC1;YTHDF1;YWHAG;ZNF184NAT_cells_gamma_deltaGSVA_HALLMARK_MITOTIC_SPINDLE
ENSG00000267059.2,UQCR11
GBMEAGIRENSG00000121940.11chr1108929507:108934942:108937076:108937418-0.46863.4545e-044.6670e-06-0.4027imageNADAR;AIFM1;AUH;BCCIP;BUD13;CELF2;CNBP;CPSF6;CSTF2T;DDX3X;DDX42;DDX54;DGCR8;DHX9;DICER1;DKC1;EIF4A3;EIF4G2;ELAVL1;FAM120A;FBL;FKBP4;FMR1;FUS;FXR1;FXR2;GNL3;GTF2F1;HNRNPA1;HNRNPA2B1;HNRNPC;HNRNPK;HNRNPL;HNRNPM;HNRNPU;HNRNPUL1;IGF2BP1;IGF2BP2;IGF2BP3;ILF3;KHDRBS1;KHDRBS2;KHSRP;LARP4B;LARP7;LIN28;LIN28A;LIN28B;LSM11;MOV10;MSI2;NONO;NOP56;NOP58;NPM1;NUMA1;PCBP2;PRPF8;PTBP1;RANGAP1;RBFOX2;RBM10;RBM22;RBM27;RBM5;RNF219;SAFB2;SF3A3;SF3B4;SLBP;SLTM;SMNDC1;SND1;SRSF1;SRSF10;SRSF7;SRSF9;TAF15;TARDBP;TIA1;TIAL1;TNRC6A;TRA2A;TROVE2;U2AF1;U2AF2;UPF1;XRN2;YTHDC1;YTHDF1;YWHAG;ZNF184NAT_cells_follicular_helperGSVA_HALLMARK_APOPTOSIS

More results



Top

5. Enriched editing regions and immune infiltration for UQCR11


all structure

check button Associations of enriched editing regions with immune infiltration.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the fraction of different immune cells according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerTypeIDImmuneCellPRCorrelationPlot
ENSG00000267059.2,UQCR11ACCEAGMonocytes1.8172e-020.4880image
chr19:1586549-1590644:-BLCAEERT_cells_CD4_memory_resting2.6416e-030.2479image
ENSG00000267059.2,UQCR11BLCAEAGT_cells_CD4_memory_resting8.0433e-030.2057image
chr19:1586549-1590644:-BRCAEERMast_cells_activated3.3342e-02-0.0832image
ENSG00000127540.10,UQCR11BRCAEAGB_cells_memory5.1232e-050.3992image
ENSG00000267059.2,UQCR11BRCAEAGDendritic_cells_resting5.7832e-030.1040image
chr19:1586549-1590644:-CESCEERDendritic_cells_activated4.9686e-020.1718image
ENSG00000267059.2,UQCR11CESCEAGMacrophages_M22.6036e-02-0.1855image
chr19:1586549-1590644:-COADEERNeutrophils1.7750e-040.3054image
ENSG00000267059.2,UQCR11COADEAGMast_cells_activated2.4782e-040.2894image
ENSG00000267059.2,UQCR11DLBCEAGT_cells_regulatory_(Tregs)2.9523e-030.6293image
chr19:1586549-1590644:-ESCAEERT_cells_CD81.5515e-030.2506image
ENSG00000127540.10,UQCR11ESCAEAGMacrophages_M22.7015e-020.4509image
ENSG00000267059.2,UQCR11ESCAEAGT_cells_CD81.6095e-030.2497image
chr19:1586549-1590644:-GBMEERT_cells_follicular_helper9.4854e-03-0.2452image
ENSG00000267059.2,UQCR11GBMEAGT_cells_gamma_delta9.6931e-030.2343image
ENSG00000267059.2,UQCR11HNSCEAGMacrophages_M14.8956e-030.1887image
ENSG00000267059.2,UQCR11KICHEAGPlasma_cells6.4052e-040.4847image
ENSG00000267059.2,UQCR11KIRCEAGT_cells_CD4_memory_activated1.0835e-020.1840image
chr19:1586549-1590644:-KIRPEERDendritic_cells_activated2.1275e-030.2861image
ENSG00000267059.2,UQCR11KIRPEAGDendritic_cells_activated3.4464e-020.1705image
chr19:1586549-1590644:-LAMLEERMacrophages_M11.3459e-030.2594image
ENSG00000267059.2,UQCR11LAMLEAGMacrophages_M11.0968e-030.2640image
chr19:1586549-1590644:-LGGEERMacrophages_M02.8037e-02-0.1075image
ENSG00000267059.2,UQCR11LGGEAGDendritic_cells_activated2.3017e-02-0.1096image
chr19:1586549-1590644:-LIHCEERNK_cells_resting4.7306e-020.2712image
ENSG00000127540.10,UQCR11LIHCEAGT_cells_CD81.9838e-020.4302image
ENSG00000267059.2,UQCR11LIHCEAGNeutrophils3.3709e-02-0.2363image
chr19:1586549-1590644:-LUADEERB_cells_naive8.1290e-03-0.1895image
ENSG00000127540.10,UQCR11LUADEAGMacrophages_M11.1561e-03-0.4897image
ENSG00000267059.2,UQCR11LUADEAGB_cells_naive2.9780e-02-0.1449image
chr19:1586549-1590644:-LUSCEERDendritic_cells_activated1.4939e-02-0.1446image
ENSG00000267059.2,UQCR11LUSCEAGMacrophages_M16.3157e-030.1543image
chr19:1586549-1590644:-MESOEERB_cells_naive9.9435e-030.4131image
ENSG00000267059.2,UQCR11MESOEAGB_cells_naive9.3080e-030.4062image
chr19:1586549-1590644:-OVEERT_cells_regulatory_(Tregs)1.1135e-020.1778image
chr19:1594674-1597357:-OVEERMacrophages_M02.6756e-030.4239image
ENSG00000267059.2,UQCR11OVEAGT_cells_regulatory_(Tregs)1.4660e-020.1659image
chr19:1586549-1590644:-PAADEERNK_cells_activated7.6914e-03-0.4430image
ENSG00000267059.2,UQCR11PAADEAGT_cells_CD84.7867e-020.2812image
ENSG00000267059.2,UQCR11PCPGEAGMonocytes3.2179e-020.3130image
chr19:1594674-1597357:-PRADEERT_cells_gamma_delta3.6043e-020.2475image
ENSG00000267059.2,UQCR11PRADEAGT_cells_regulatory_(Tregs)2.3696e-020.1297image
chr19:1586549-1590644:-READEERPlasma_cells1.0244e-020.3435image
ENSG00000267059.2,UQCR11READEAGT_cells_follicular_helper1.5569e-020.3247image
chr19:1586549-1590644:-SARCEERMonocytes2.2335e-02-0.2272image
ENSG00000267059.2,UQCR11SARCEAGPlasma_cells2.9221e-020.1959image
chr19:1586549-1590644:-SKCMEERT_cells_CD81.4921e-040.2344image
ENSG00000127540.10,UQCR11SKCMEAGNK_cells_activated2.3474e-020.4059image
ENSG00000267059.2,UQCR11SKCMEAGT_cells_CD84.1635e-030.1678image
chr19:1586549-1590644:-STADEERNK_cells_activated2.2597e-020.1253image
chr19:1594674-1597357:-STADEERNK_cells_resting4.4970e-030.2631image
ENSG00000267059.2,UQCR11STADEAGNK_cells_activated2.3041e-020.1232image
chr19:1586549-1590644:-TGCTEERB_cells_memory9.4790e-060.5154image
ENSG00000267059.2,UQCR11TGCTEAGB_cells_memory1.7831e-040.4145image
chr19:1586549-1590644:-THCAEERNK_cells_resting7.6388e-070.4253image
chr19:1594674-1597357:-THCAEERT_cells_CD4_memory_activated2.0509e-02-0.2587image
ENSG00000267059.2,UQCR11THCAEAGNK_cells_resting4.8672e-060.3332image
chr19:1586549-1590644:-THYMEERT_cells_follicular_helper2.9663e-02-0.3048image
ENSG00000267059.2,UQCR11THYMEAGT_cells_follicular_helper4.6283e-02-0.2724image
ENSG00000267059.2,UQCR11UCECEAGT_cells_gamma_delta1.3868e-020.3016image
chr19:1586549-1590644:-UVMEERB_cells_naive4.1610e-020.3807image


Top

6. Enriched editing regions and immune gene sets for UQCR11


all structure

check button Correlation of enriched editing regions with epithelial-mesenchymal transition.
* First, the differences of enriched editing regions between Epi and Mes groups (defined by KS-test) were compared (P<0.05 and Informative number >=20).
* Second, the correlations between enriched editing regions and gene set score of HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the EERs/EAGs significantly edited between Epi and Mes group.
ID_eventscancerTypeE2M_PBoxplotCorPCorRCorrelationPlot


Top

check button Correlations of enriched editing regions with hypoxic.
* First, there are four hypoxia scores used in the database. The first three hypoxic scores were calculated on three gene sets of Buffa, Ragnum and Winter based on one previous study (PMID: 32024819). One last hypoxia score was defined on HALLMARK_HYPOXIA by GSVA method.
* Second, the correlations enriched editing regions with the four hypoxic scores were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the EERs/EAGs significantly correlated with all four hypoxia gene set scores. For more results, please go to download page.
ID_eventscancerTypeBuffa_P Buffa_R Ragnum_P Ragnum_R Winter_P Winter_R HALLMARK_P HALLMARK_R CorrelationPlot


Top

check button Associations of enriched editing regions with hallmark gene sets from MSigDB.
* P<0.05 and Informative number >=20.
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the scores of 50 hallmark genesets according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerHallmarkTypeTypePRCorrelationPlot
ENSG00000267059.2,UQCR11BLCAGSVA_HALLMARK_ADIPOGENESISEAG1.1688e-020.1959image
chr19:1586549-1590644:-BLCAGSVA_HALLMARK_P53_PATHWAYEER6.0901e-040.2813image
ENSG00000127540.10,UQCR11BRCAGSVA_HALLMARK_MITOTIC_SPINDLEEAG1.2697e-04-0.3794image
chr19:1586549-1590644:-BRCAGSVA_HALLMARK_XENOBIOTIC_METABOLISMEER2.4083e-070.2001image
ENSG00000267059.2,UQCR11BRCAGSVA_HALLMARK_XENOBIOTIC_METABOLISMEAG1.4851e-060.1804image
chr19:1586549-1590644:-CESCGSVA_HALLMARK_G2M_CHECKPOINTEER2.4283e-02-0.1968image
ENSG00000267059.2,UQCR11CESCGSVA_HALLMARK_G2M_CHECKPOINTEAG9.9088e-04-0.2716image
ENSG00000267059.2,UQCR11COADGSVA_HALLMARK_MYC_TARGETS_V2EAG4.0183e-05-0.3225image
chr19:1586549-1590644:-COADGSVA_HALLMARK_MYC_TARGETS_V2EER2.0592e-04-0.3026image
ENSG00000267059.2,UQCR11DLBCGSVA_HALLMARK_MTORC1_SIGNALINGEAG5.8098e-04-0.7006image
chr19:1586549-1590644:-ESCAGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEER3.2447e-020.1708image
chr19:1586549-1590644:-GBMGSVA_HALLMARK_XENOBIOTIC_METABOLISMEER1.0233e-070.4794image
ENSG00000267059.2,UQCR11GBMGSVA_HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAYEAG1.1825e-070.4591image
ENSG00000267059.2,UQCR11HNSCGSVA_HALLMARK_PANCREAS_BETA_CELLSEAG2.5666e-040.2436image
chr19:1586549-1590644:-HNSCGSVA_HALLMARK_E2F_TARGETSEER1.2087e-03-0.2279image
ENSG00000267059.2,UQCR11KICHGSVA_HALLMARK_APICAL_SURFACEEAG2.9880e-03-0.4282image
chr19:1586549-1590644:-KIRCGSVA_HALLMARK_DNA_REPAIREER3.7840e-040.2760image
ENSG00000267059.2,UQCR11KIRCGSVA_HALLMARK_DNA_REPAIREAG1.1274e-020.1830image
ENSG00000267059.2,UQCR11KIRPGSVA_HALLMARK_HEME_METABOLISMEAG1.1127e-03-0.2603image
ENSG00000267059.2,UQCR11LAMLGSVA_HALLMARK_G2M_CHECKPOINTEAG1.6238e-03-0.2552image
chr19:1586549-1590644:-LAMLGSVA_HALLMARK_G2M_CHECKPOINTEER1.1015e-03-0.2639image
ENSG00000267059.2,UQCR11LGGGSVA_HALLMARK_FATTY_ACID_METABOLISMEAG1.7598e-040.1799image
chr19:1586549-1590644:-LGGGSVA_HALLMARK_BILE_ACID_METABOLISMEER4.9566e-060.2212image
ENSG00000127540.10,UQCR11LIHCGSVA_HALLMARK_PROTEIN_SECRETIONEAG6.0067e-03-0.4977image
chr19:1586549-1590644:-LIHCGSVA_HALLMARK_NOTCH_SIGNALINGEER1.5174e-02-0.3289image
ENSG00000267059.2,UQCR11LIHCGSVA_HALLMARK_NOTCH_SIGNALINGEAG2.4265e-02-0.2502image
ENSG00000127540.10,UQCR11LUADGSVA_HALLMARK_PROTEIN_SECRETIONEAG3.7784e-02-0.3256image
chr19:1586549-1590644:-LUADGSVA_HALLMARK_APICAL_SURFACEEER2.6179e-020.1596image
ENSG00000127540.10,UQCR11LUSCGSVA_HALLMARK_KRAS_SIGNALING_DNEAG9.8833e-03-0.4427image
chr19:1586549-1590644:-LUSCGSVA_HALLMARK_INTERFERON_GAMMA_RESPONSEEER1.5451e-020.1438image
chr19:1586549-1590644:-MESOGSVA_HALLMARK_KRAS_SIGNALING_UPEER1.4145e-020.3949image
ENSG00000267059.2,UQCR11MESOGSVA_HALLMARK_MYOGENESISEAG1.0148e-020.4019image
chr19:1594674-1597357:-OVGSVA_HALLMARK_PI3K_AKT_MTOR_SIGNALINGEER8.8598e-04-0.4643image
ENSG00000127540.10,UQCR11OVGSVA_HALLMARK_PI3K_AKT_MTOR_SIGNALINGEAG1.4944e-03-0.6008image
ENSG00000267059.2,UQCR11OVGSVA_HALLMARK_MITOTIC_SPINDLEEAG3.6824e-03-0.1968image
chr19:1586549-1590644:-OVGSVA_HALLMARK_P53_PATHWAYEER3.0332e-040.2510image
chr19:1586549-1590644:-PAADGSVA_HALLMARK_ESTROGEN_RESPONSE_EARLYEER3.0931e-020.3653image
ENSG00000267059.2,UQCR11PCPGGSVA_HALLMARK_CHOLESTEROL_HOMEOSTASISEAG2.4298e-03-0.4320image
chr19:1586549-1590644:-PCPGGSVA_HALLMARK_OXIDATIVE_PHOSPHORYLATIONEER1.3990e-020.4238image
chr19:1586549-1590644:-PRADGSVA_HALLMARK_MYOGENESISEER1.6397e-020.1418image
chr19:1594674-1597357:-PRADGSVA_HALLMARK_MITOTIC_SPINDLEEER1.2779e-02-0.2921image
ENSG00000267059.2,UQCR11PRADGSVA_HALLMARK_MITOTIC_SPINDLEEAG6.6547e-03-0.1553image
ENSG00000267059.2,UQCR11READGSVA_HALLMARK_APICAL_JUNCTIONEAG2.7078e-04-0.4724image
chr19:1586549-1590644:-READGSVA_HALLMARK_APICAL_JUNCTIONEER3.6261e-04-0.4637image
chr19:1586549-1590644:-SARCGSVA_HALLMARK_HEME_METABOLISMEER4.2350e-030.2823image
ENSG00000267059.2,UQCR11SKCMGSVA_HALLMARK_MYC_TARGETS_V1EAG7.0360e-03-0.1580image
chr19:1586549-1590644:-SKCMGSVA_HALLMARK_INTERFERON_ALPHA_RESPONSEEER2.9746e-030.1846image
ENSG00000127540.10,UQCR11SKCMGSVA_HALLMARK_KRAS_SIGNALING_DNEAG3.1658e-020.3867image
chr19:1594674-1597357:-STADGSVA_HALLMARK_KRAS_SIGNALING_DNEER1.3334e-02-0.2302image
chr19:1586549-1590644:-STADGSVA_HALLMARK_COAGULATIONEER5.8187e-030.1513image
ENSG00000127540.10,UQCR11STADGSVA_HALLMARK_KRAS_SIGNALING_DNEAG1.8303e-04-0.3950image
ENSG00000267059.2,UQCR11STADGSVA_HALLMARK_COAGULATIONEAG3.4704e-020.1146image
ENSG00000267059.2,UQCR11TGCTGSVA_HALLMARK_UNFOLDED_PROTEIN_RESPONSEEAG1.1284e-02-0.2873image
chr19:1586549-1590644:-TGCTGSVA_HALLMARK_UNFOLDED_PROTEIN_RESPONSEEER9.9605e-03-0.3151image
ENSG00000267059.2,UQCR11THCAGSVA_HALLMARK_APICAL_SURFACEEAG3.2681e-02-0.1593image
chr19:1586549-1590644:-THCAGSVA_HALLMARK_MTORC1_SIGNALINGEER5.7166e-030.2458image
chr19:1594674-1597357:-THCAGSVA_HALLMARK_HEDGEHOG_SIGNALINGEER2.8892e-03-0.3289image
ENSG00000267059.2,UQCR11UCECGSVA_HALLMARK_ALLOGRAFT_REJECTIONEAG2.3424e-020.2788image
ENSG00000267059.2,UQCR11UCSGSVA_HALLMARK_MITOTIC_SPINDLEEAG5.5181e-03-0.5709image


Top

7. Enriched editing regions and drugs for UQCR11


all structure

check button Correlations between enriched editing regions and drug sensitivity.
* First, the drug sensitivity (IS50) was estimated on 84 drugs by pRRophetic package.
* Second, the correlations between editing enriched regions and drug sensitivity were analyzed (P<0.05 and Informative number >=20).
* EER: enriched editing region, EAG: EER-associated genes.
* Only shows the most significant correlation result of EERs/EAGs with the IS50 scores of 84 drugs according to correlation coefficient (R). For more results, please go to download page.
ID_eventscancerDrugTypePRCorrelationPlot
ENSG00000267059.2,UQCR11BLCABIRB.0796EAG1.2105e-020.1949image
chr19:1586549-1590644:-BLCABIRB.0796EER1.4090e-030.2628image
ENSG00000267059.2,UQCR11BRCAMG.132EAG1.0986e-02-0.0959image
ENSG00000127540.10,UQCR11BRCAAS601245EAG4.3344e-030.2872image
chr19:1586549-1590644:-BRCAMG.132EER2.5710e-03-0.1177image
chr19:1586549-1590644:-CESCDasatinibEER5.6812e-07-0.4206image
ENSG00000267059.2,UQCR11CESCDasatinibEAG2.2263e-05-0.3466image
chr19:1586549-1590644:-COADCCT007093EER6.4263e-05-0.3246image
ENSG00000267059.2,UQCR11COADCCT007093EAG7.5109e-06-0.3500image
ENSG00000267059.2,UQCR11DLBCAG.014699EAG6.1382e-030.5904image
ENSG00000127540.10,UQCR11ESCAJNK.Inhibitor.VIIIEAG7.6767e-030.5304image
chr19:1586549-1590644:-ESCAGDC.0449EER2.6254e-03-0.2393image
ENSG00000267059.2,UQCR11ESCABMS.536924EAG2.3332e-04-0.2897image
chr19:1586549-1590644:-GBMGNF.2EER1.7155e-08-0.5040image
ENSG00000267059.2,UQCR11GBMGNF.2EAG6.9562e-10-0.5239image
chr19:1586549-1590644:-HNSCAZD.0530EER1.2442e-02-0.1769image
ENSG00000267059.2,UQCR11HNSCAZD.0530EAG7.9597e-03-0.1785image
ENSG00000267059.2,UQCR11KICHBIRB.0796EAG2.1849e-03-0.4405image
ENSG00000267059.2,UQCR11KIRCJW.7.52.1EAG1.5845e-02-0.1744image
chr19:1586549-1590644:-KIRCMG.132EER1.8355e-02-0.1851image
ENSG00000267059.2,UQCR11KIRPLapatinibEAG3.2823e-050.3280image
chr19:1586549-1590644:-KIRPA.770041EER1.0160e-02-0.2409image
ENSG00000267059.2,UQCR11LAMLBicalutamideEAG1.2357e-03-0.2614image
chr19:1586549-1590644:-LAMLErlotinibEER2.6081e-03-0.2441image
ENSG00000267059.2,UQCR11LGGBMS.708163EAG5.8039e-05-0.1926image
chr19:1586549-1590644:-LGGABT.888EER4.6332e-050.1979image
ENSG00000267059.2,UQCR11LIHCBosutinibEAG3.7039e-040.3861image
chr19:1586549-1590644:-LIHCBAY.61.3606EER8.9892e-050.5074image
ENSG00000127540.10,UQCR11LIHCBosutinibEAG1.1860e-030.5720image
ENSG00000267059.2,UQCR11LUADAZ628EAG3.3128e-02-0.1444image
ENSG00000127540.10,UQCR11LUSCEmbelinEAG4.7866e-030.4791image
ENSG00000267059.2,UQCR11LUSCCMKEAG4.4622e-02-0.1138image
chr19:1586549-1590644:-LUSCAZD7762EER2.8258e-02-0.1304image
ENSG00000267059.2,UQCR11MESOCEP.701EAG1.6317e-02-0.3776image
ENSG00000267059.2,UQCR11OVBryostatin.1EAG1.3944e-04-0.2563image
ENSG00000127540.10,UQCR11OVKIN001.135EAG4.1266e-030.5532image
chr19:1594674-1597357:-OVJW.7.52.1EER4.7432e-040.4851image
chr19:1586549-1590644:-OVAxitinibEER1.1394e-020.1773image
chr19:1586549-1590644:-PAADAZD.2281EER1.8698e-020.3955image
ENSG00000267059.2,UQCR11PAADJNK.9LEAG3.3571e-02-0.3012image
ENSG00000267059.2,UQCR11PCPGBI.2536EAG2.8098e-02-0.3204image
ENSG00000267059.2,UQCR11PRADBAY.61.3606EAG3.9705e-060.2610image
chr19:1586549-1590644:-PRADCytarabineEER4.0746e-040.2077image
chr19:1594674-1597357:-PRADBMS.754807EER1.9171e-02-0.2755image
ENSG00000267059.2,UQCR11READImatinibEAG3.7685e-040.4626image
chr19:1586549-1590644:-READMetforminEER5.4545e-04-0.4512image
chr19:1586549-1590644:-SARCJW.7.52.1EER1.6702e-03-0.3089image
ENSG00000267059.2,UQCR11SARCBortezomibEAG2.6363e-03-0.2678image
ENSG00000267059.2,UQCR11SKCMCMKEAG4.4378e-030.1666image
chr19:1586549-1590644:-SKCMEpothilone.BEER4.7920e-030.1754image
ENSG00000127540.10,UQCR11SKCMCMKEAG1.6178e-020.4285image
chr19:1594674-1597357:-STADCCT007093EER2.5507e-030.2788image
ENSG00000267059.2,UQCR11STADCisplatinEAG2.2297e-03-0.1653image
chr19:1586549-1590644:-STADCisplatinEER1.2208e-02-0.1376image
ENSG00000127540.10,UQCR11STADCamptothecinEAG1.4244e-02-0.2650image
ENSG00000267059.2,UQCR11TGCTBX.795EAG9.9883e-030.2919image
chr19:1586549-1590644:-TGCTEHT.1864EER1.9807e-03-0.3740image
ENSG00000127540.10,UQCR11THCACisplatinEAG6.4388e-03-0.5024image
chr19:1594674-1597357:-THCAAICAREER1.1905e-020.2799image
ENSG00000267059.2,UQCR11THYMJNK.Inhibitor.VIIIEAG4.5409e-030.3805image
ENSG00000267059.2,UQCR11UCECGDC.0449EAG4.9943e-03-0.3416image
ENSG00000267059.2,UQCR11UCSBortezomibEAG2.5916e-02-0.4738image
chr19:1586549-1590644:-UVMDMOGEER4.2243e-02-0.3796image


Top

check button EAGs targeted by drugs from DrugBank database.
* EAG: EER-associated genes.
EERENSTUniprotIDDrugBankIDDrugDrugType